LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g00332	ATGGCTTGTACAAGTGCTACGCTCCCTTTGGGTTTCGCACAATTTGAGTGTCTTTCTCAGCGTCGTCAAGTTTTCTTCGCCAAACGAATCCCAGTTTCTTCTTCTGCTACTTTTACTTCAGTTGCTTCGAGACATTGGAAGTGCGTTTATGCAAAAGCTATTTCAACGGACCCTCAAAACGCGGTTAGCGAAACGCAGAGTTTGGAGTTGAAGGAGGATAGCCAAAGCAATAACCCATCGCCATCATCCAAACTGGTCCTTGTTGTTGGTGCCTCCGGAGGAGTTGGGCAGCTGGTAGCAGCATCACTGCTTCAGCGGAATGTTAAGTCACGCTTGATACTTAGGGATCCCGAGAAAGCCACGGCACTGTTTGGTAAACAAGATGAGGAGAGACTGCAGGTATTCAAAGGGGACACAAGGAAGCAGGATGATTTGGATCCATCCATATTCGAGGGAGTCACACATGTGATTTGCTGCACTGGAACCACAGCTTTTCCTTCAAGGCGGTGGGATGATGACAATACACCAGAAAGGGTTGATTGGTTGGGAGTGAAGAATCTAGTATCTGCATTGCCTTCCTCAGTGAAGAGAGTTGTTCTTTTGTCATCAATAGGTGTGACCAAGTATAATGAATTGCCATGGAGCATTATGAACCTATTCGGTGTCTTGAAGTATAAGAAGTTGGGGGAGGATTTTCTTCGGAATTCTGGCCTTCCATACACCATAATTAGAGCTGGAAGGTTGACAGATGGACCATACACATCTTATGATCTCAATACTTTACTCAAAGCAACAGCTGGACAACGACGAGCAGTTCTTATAGGTCAAGGAGATAAACTAGTGGGAGAGGCCAGCAGAATTGTGGTTGCTGAAGCTTGCATACAGGCACTAGATCTTGAAGTCACTGAAAACCAAGTATATGAAGTTAACTCTGTTGAGGGGGAAGGTCCGGGATATGAAGCTCAGAAGTGGCAAGAGCTTTTTGAGGCTGCACACTCCTCCTAA	1005	0.4577	MACTSATLPLGFAQFECLSQRRQVFFAKRIPVSSSATFTSVASRHWKCVYAKAISTDPQNAVSETQSLELKEDSQSNNPSPSSKLVLVVGASGGVGQLVAASLLQRNVKSRLILRDPEKATALFGKQDEERLQVFKGDTRKQDDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPERVDWLGVKNLVSALPSSVKRVVLLSSIGVTKYNELPWSIMNLFGVLKYKKLGEDFLRNSGLPYTIIRAGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLEVTENQVYEVNSVEGEGPGYEAQKWQELFEAAHSS*	335

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g00332	334	Pfam	NAD(P)H-binding	90	298	IPR016040	-
	Rops4g00332	334	FunFam	NAD(P)-binding Rossmann-fold superfamily protein	82	333	-	-
	Rops4g00332	334	CDD	SDR_a5	86	311	-	-
	Rops4g00332	334	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	82	310	IPR036291	-
	Rops4g00332	334	Gene3D	-	82	333	-	-
	Rops4g00332	334	PANTHER	FLAVIN REDUCTASE-RELATED	66	332	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g00332	Rops-Chr4	9964288	9973066	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops4g00332	84	213	Miscellaneous Gene Families	AT5G19440	34.043	4.59e-07	48.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g00332	-		-	gmx:100804322	494.197