LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g00298	ATGAACCAAACCACAATGGTGTTCGAAAAGCCAATTGGATATTACTCTCCTTCAGTTCAAGAGCTTATTGTTATTGATGATGTGCTCTCGGCGATGGTTGGGATTGAAGGACGTCACATTTTAATACAAACAGTTCGTGGAAAGAAGGATGATATTACTTTCTTGGTTGACCCATCTATGGATTTGGCACTGCAGGAGTTGGCAAAACGGATATTTCCTCTTTGTAGGAGCTTTCTGTTGATTGACCAGTTTGTGGAGTCAAGGTCTCAATTCCAGAATGGCCTAGTTAATCATGCCTTTTCTGCTGCACTGAGGGCACTTCTTCTCGACTACCAGGCCATGGTGGCACAACTTGAGCACCAATTTCGGCTTGGGAGACTTTCCCTTCAAGGATTATGGTTCTACTGTCAGCCCATGATGAGGTCAATGCAGGCGTTATCCACTATCACACAGAAGGCTTCAGTCAACAATTTTTCTGGTTCTGCTGTTCTTAACTTACTGCAGAGCCAGGCGAAGGCTATGGCTGGAGATAATAATGTCAGGTTGTTGCTGGAGAAAATGACACAGTGTGCAAGTAGTGCTTACATGAGCATATTAGAAAGTTGGGTCTATGAAGGAGTAATAGATGATCCTTATGGTGAATTTTTCATTGCAGAGGACAAATCTCTTCAAAAGGAGAGTCTCACTCAAGATTATGACGCTAAATATTGGCGACATCGTTACAGCCTCAAAGAAGGAATTCCTAGTTTCCTTGCAAATATTGCAGGGACAATTTTGACCACAGGAAAATATCTAAATGTCATGAGAGAATGTGGGCACAATGTTCAGGTCCCTCCATTGGAAAATTCAAAACTAATGGGCTTTGGCTCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAACTTCGCAAGTGGCGAACTCTTGAATCTCATTAAGGAAAAGTATGATCTAACAGGAAAGCTGCGGTCTATAAAACACTACCTTCTTCTTGATCAGGGTGATTTCTTAGTACATTTTATGGATATTGCTCGAGATGAGTTGGCTAAAAAGCCTGATGAAGTTTCAGTTGAGAAGTTGCAGTCTCTGCTAGACCTTGCTTTGCGTACTACAGCAGCTGCGACAGATCCTTTGCATGAAGGCTTAACCTGTGCTGTGGAAAGATCTTCTTTGCTTACAAGGTTGGGCACATTAAATGATCTTGAAGTTGGTCGGAGAAAATCTGGTAGCAATGATCTGCTGGAGGAGCCTGTTAGCATCACCAGCCTTGAAACATTTTCACTAAGTTATAAGGTGCACTGGCCACTGTCTATAGTACTATCACGTAAAGCCCTTGCAAAGTACCAGTTAATTTTTCGATTTCTTTTCCACTGTAAACATGTTGACCGTCAGCTGTGTGGAGCATGGCAAGTCCATCAAGGAGTTCGTGCTCTCAATACACGTGGAACTGCTATCTCCAGATCATCCCTTCTTTGCCGTAGTATGCTTAAATTTATCAACAACCTTCTACACTATCTAACATTTGAGGTTATCGAACCCAATTGGCATCTGATGCATAACAGACTTCAGTCAGCAAATAGCATTGATGAAGTTATACAACATCACGATTTTTTCCTTGATAAATGTTTGAGAGAATGTTTACTTCTTTTACCTGAGCTGCTGAAGAAGGTGGAGAGGCTAAAATCCATGTGCCTACAATATGCAGCAGCAACTCAGTGGCTTATATCATCTTCTATTGTATTACATAGTCCAGATGAACCCATTGATGATTCAATTGGAACCAAGCAACGGAAATCAGGTCAGGTCCTGAAGTCAACCACCAGAAATGTGGCAGTCACTGATTCTGTTCTCAAATTCGAGAAGGAATTTAATACCGAGCTTCAGAGTCTTGGATCAATCTTGAGTAGTAGCTCCCAGGCAGAGCCATATCTGGCCCATCTTGCTCAATGGATTCTTGGTGTTAAGCATGAAAAGAATGACACAGTGATGAGTGATTGTGTTTGTCATGCGTTAAGGGAGAGGCAACTGTGGGATATCGATGAAGAGGGAAGGGCAAAGATCGAAGAGGGGTTTGGAGTTGTGGTTGAGGGTGCAGGCCCAGTGAGGGAGGCGATCGGCGGCGGATATGGCGATGGAGAGAGAGAGTGTCGTATGGGGAGAGGAGAGAGAAGAGGGTTTTGGAGAGATCGGGGTTTCTCGATCCAACTGTTACTGGAGGATTAG	2226	0.429	MNQTTMVFEKPIGYYSPSVQELIVIDDVLSAMVGIEGRHILIQTVRGKKDDITFLVDPSMDLALQELAKRIFPLCRSFLLIDQFVESRSQFQNGLVNHAFSAALRALLLDYQAMVAQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTITQKASVNNFSGSAVLNLLQSQAKAMAGDNNVRLLLEKMTQCASSAYMSILESWVYEGVIDDPYGEFFIAEDKSLQKESLTQDYDAKYWRHRYSLKEGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPLENSKLMGFGSNHHYLECIKAAYNFASGELLNLIKEKYDLTGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAATDPLHEGLTCAVERSSLLTRLGTLNDLEVGRRKSGSNDLLEEPVSITSLETFSLSYKVHWPLSIVLSRKALAKYQLIFRFLFHCKHVDRQLCGAWQVHQGVRALNTRGTAISRSSLLCRSMLKFINNLLHYLTFEVIEPNWHLMHNRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVERLKSMCLQYAAATQWLISSSIVLHSPDEPIDDSIGTKQRKSGQVLKSTTRNVAVTDSVLKFEKEFNTELQSLGSILSSSSQAEPYLAHLAQWILGVKHEKNDTVMSDCVCHALRERQLWDIDEEGRAKIEEGFGVVVEGAGPVREAIGGGYGDGERECRMGRGERRGFWRDRGFSIQLLLED*	742

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g00298	741	Pfam	Gamma tubulin complex component C-terminal	319	649	IPR040457	GO:0043015
	Rops4g00298	741	FunFam	Gamma-tubulin complex component	319	653	-	-
	Rops4g00298	741	Pfam	Gamma tubulin complex component N-terminal	25	316	IPR041470	-
	Rops4g00298	741	PANTHER	GAMMA TUBULIN COMPLEX PROTEIN	13	646	IPR007259	GO:0000226\|GO:0000922\|GO:0005815\|GO:0007020\|GO:0043015
	Rops4g00298	741	Gene3D	-	319	653	IPR042241	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g00298	Rops-Chr4	9024356	9037578	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g00298	K16569		-	gmx:100795585	1138.64