Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00238 ATGGCCTTCAAGCACCTCTTAACCGCCGCGGCTCGCCGCACCTCCGCCGTCCGCTCCGCCTCAACATCCCCAGCAACAACGGCTTCCCCATCCCCTCCCGCCCCTCACGTCATGATCTACGACCGCCTCGCCGAGTCCGTCAAATCCAAGCTCCGCCGCCTGGAAAACCCCGACCCACGCTTCCTCAAACATGGGTGCCCAATACCCACTCTTTGTGACCACACACGCGTCCTTTCAACCCCCGAGACACGTGTCACCACGCTCCCTAACGGCCTCCGCGTCGCCACAGAGTCCTCCCTCGCCGCCAGGACCGCCACCGTGGGGGTTTGGATCGACGCCGGGTCGAGGTTTGAGACAGAGGAGACAAACGGGACGGCGCATTTTCTCGAACACATGATCTTCAAGGGAACAGCGAAGAGATCCGCGAGGGAACTTGAGGAGGAGATTGAGAATATGGGAGGGCACCTTAATGCTTACACTTCGAGGGAACAGACAACGTATTATGCTAAGGTTACACATGATGATGTTCCTAAGGCGCTTGATATTTTGGCGGATATTTTGCAGAATTCGAAGTTTGATGATAATAGGATCAGTCGTGAGCGTGATGTCATTCTAAGGGAAATGGAGGAGGTTGAGGGTCAAACAGAGGAAGTAATTTTTGACCATTTACATGCAACTGCTTTCCAGTACACTCCACTTGGAAGAACAATTCTTGGACCTGCTCAGAATATTAAGACAATCACCAAAGATCATCTGCAGAACTACATTCAGACACACTACACGGCTCCTAGGATGGTCGTAGCTGCATCTGGAGCTGTCAAACATGAAGATATTGTTGAGCAAGTAAAAGCATTGTTTACCAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCTGCCATGTTTACTGGTTCTGAGGTTAGAATATTGGATGATGATATTCCCCTTGCGCAATTTACAGTGGCTTTTGAAGGTGCAGCTTGGACGGATCCTGATTCCATTGCCCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAGACAGTGGGAGGTGGAAAACACATGGGTTCTGAGTTAGCACAACGAGTCGGAATTAATGAAGTTGCTGAAAGCATGATGGCCTTCAATACCAATTACAAGGATACAGGTCTTTTTGGTGTTTATGCTGTTGCGAAGAAGGATTGCTTGGATGATTTGTGCTATGCAATAATGTATGAAACAACCAAGCTGGCTTATCGGGTTTCAGAAGATGATGTTACACGTGCTCGTAATCAGTTGAAATCTTCGCTTCTGCTCCACATAGATGGAACAAGTCCGGTAGCTGAAGATATTGGGCGTCAGCTACTCACCTACGGCAGAAGAATACCATTTGCAGAATTGTTGGCTAGAATTGATGCTGTTGATGCAAGCACAATTAAACGTGTTGCAAACCGATTTATTTATGACAAGGATATTGCAATTGCTGCCATGGGACCTATTCAGCGTTTGCCTGATTACAACTGGTTCAGACGCAGAACCTACTGGAACCGCTATTAG 1554 0.4826 MAFKHLLTAAARRTSAVRSASTSPATTASPSPPAPHVMIYDRLAESVKSKLRRLENPDPRFLKHGCPIPTLCDHTRVLSTPETRVTTLPNGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRSARELEEEIENMGGHLNAYTSREQTTYYAKVTHDDVPKALDILADILQNSKFDDNRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKDHLQNYIQTHYTAPRMVVAASGAVKHEDIVEQVKALFTKLSTDPTTASQLVAKEPAMFTGSEVRILDDDIPLAQFTVAFEGAAWTDPDSIALMVMQAMLGSWNKTVGGGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKKDCLDDLCYAIMYETTKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELLARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00238 517 Gene3D - 299 517 - -
Rops4g00238 517 MobiDBLite consensus disorder prediction 14 36 - -
Rops4g00238 517 SUPERFAMILY LuxS/MPP-like metallohydrolase 311 507 IPR011249 GO:0046872
Rops4g00238 517 ProSitePatterns Insulinase family, zinc-binding region signature. 114 137 IPR001431 GO:0004222|GO:0006508
Rops4g00238 517 FunFam Mitochondrial-processing peptidase subunit beta 71 291 - -
Rops4g00238 517 Gene3D - 73 292 - -
Rops4g00238 517 SUPERFAMILY LuxS/MPP-like metallohydrolase 80 286 IPR011249 GO:0046872
Rops4g00238 517 Pfam Peptidase M16 inactive domain 247 432 IPR007863 -
Rops4g00238 517 PANTHER METALLOPROTEASE 78 503 - -
Rops4g00238 517 Coils Coil 142 162 - -
Rops4g00238 517 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 303 517 - -
Rops4g00238 517 Pfam Insulinase (Peptidase family M16) 93 240 IPR011765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00238 Rops-Chr4 7771471 7783501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00238 K17732 - gmx:100800696 905.59