Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00152 ATGGGAACAAAGAGGGTTTCCCCAATGAGTGTTTTGTTTGAATGGTTGAGGAAGCAGTCTATGAAAGTGAAGATCTTTATGGGGGCAGTACTTACTGTTTGTGCTTTGGTGGCTCTAAAGTTTACGGTCAAAAATCCCTTCCATTTCTTCATTGCCTCTGAAACAATCCATCTTGCTGGGATTATTGTCCTCATATACAAGCTCTTCGCCTACAAAACCTGCTCTGGTTTATCCCTCAAGACCCAAGAACTCACGGCTTTGTTCCTTGCAACAAGATTGAGTTGTAGCACCTTCATGGAGGCTAACATCCACACCATGCTAGATATGATATCTCTCTTGTCAACGTTACTAGTAATATGGGTGATAAGATTCAAGTTGAAGTCATCTTATATCAAGGAGCTTGACAACCTACGACTATCCTTTGTGGTGGTACCTTCTGCAATCCTTGCAATACTAATCCACCCTTATACAAGTCATATTCGCATAGCTCGAGTCCTTTGGGCATTCAATGTGTATTTGGAAGCTGTTTCGGTTCTCCCTCAACTTCGACTTATGCAAAATGCAAAGATGGTTGAAACATTTACAGGGTATTATGTATTTGCTCTCGGCGTTTCAAGATTCTTGGGATTGGCTCATTGGATTATTCAGCTTTATGAGACTCGAGGGTCGTTTTTATTTTTGGTTGGGAGTGGATATTTCTGGTTAACAGCAGCTTTTCTCTCAGAGATGGTTCAATCGTTCATTTTGGCTGACTTTTGTTACTATTACATCAAGAGCTTCATGCAAGGGCAACTTTTGTGGAAGATGCCTGTTTAA 816 0.4093 MGTKRVSPMSVLFEWLRKQSMKVKIFMGAVLTVCALVALKFTVKNPFHFFIASETIHLAGIIVLIYKLFAYKTCSGLSLKTQELTALFLATRLSCSTFMEANIHTMLDMISLLSTLLVIWVIRFKLKSSYIKELDNLRLSFVVVPSAILAILIHPYTSHIRIARVLWAFNVYLEAVSVLPQLRLMQNAKMVETFTGYYVFALGVSRFLGLAHWIIQLYETRGSFLFLVGSGYFWLTAAFLSEMVQSFILADFCYYYIKSFMQGQLLWKMPV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00152 271 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 49 259 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 Pfam ER lumen protein retaining receptor 73 216 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 PRINTS ER lumen protein retaining receptor signature 189 203 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 PRINTS ER lumen protein retaining receptor signature 167 187 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016020|GO:0046923
Rops4g00152 271 PRINTS ER lumen protein retaining receptor signature 203 221 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00152 Rops-Chr4 4847923 4864490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00152 1 271 Miscellaneous Gene Families AT3G25160 63.235 1.31e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00152 - K10949 gmx:100790733 426.017