Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00017 ATGGCGGGTTCGTCCCCGAGTACTGTGCTTGTTACTGGAGCTGGTGGTCGCACAGGACAAATAGTCTATAAAAAATTAAAAGAGAAGCCAAACCAATATATTGCCAGAGGTCTGGTCAGAACAGAAGAAAGCAAACAGAAAATTGGCGGTGCAGATGATGTTTTTGTTGGGGATATCAGAGATGCTGGAAGTATCATTCCTGCGATTCAAGGTGTGGATGCTCTCATAATTCTCACAAGTGCAGTCCCAAAAATGAAGCCAGGGTTTGATCCAACCAAAGGTGGAAGGCCTGAGTTCTATTTTGACGATGGTGCATATCCTGAACAGGTTGACTGGATTGGGCAGAAAAATCAAATAGATGCTGCTATGGCTGCAGGAGTGAAGCATGTTGTGTTGGTTGGGTCCATGGGTGGAACAAACCCTAACCATCCTTTGAACAGCTTGGGTAATGGGAATATATTGGTTTGGAAAAGAAAGGCTGAACAATATCTGGCTGATTCTGGTGTTCCATACACGATCATAAGGCCTGGTGGCTTGCTAGATAAAGAGGGAGGTCTTCGGGAACTCATTGTAGGGAAGGATGACGAGCTTCTCCAGACTGAAACTAAAACCATACCTAGAGCTGATGTTGCAGAAGTCTGTGTTCAGGCACTAAATTATGAGGAGACTAAATTTAAGGCGTTTGACTTGGCATCGAAACCAGAGGGAGTAGGTACACCAACAACAGACTTCAAGGCTTTGTTTTCCCAGATCACTTCTCGTTTTTTATTTTGA 774 0.4419 MAGSSPSTVLVTGAGGRTGQIVYKKLKEKPNQYIARGLVRTEESKQKIGGADDVFVGDIRDAGSIIPAIQGVDALIILTSAVPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAMAAGVKHVVLVGSMGGTNPNHPLNSLGNGNILVWKRKAEQYLADSGVPYTIIRPGGLLDKEGGLRELIVGKDDELLQTETKTIPRADVAEVCVQALNYEETKFKAFDLASKPEGVGTPTTDFKALFSQITSRFLF* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00017 257 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 232 IPR036291 -
Rops4g00017 257 Gene3D - 6 255 - -
Rops4g00017 257 Pfam NAD(P)H-binding 13 219 IPR016040 -
Rops4g00017 257 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 4 255 IPR044163 GO:0016491
Rops4g00017 257 CDD SDR_a5 8 230 - -
Rops4g00017 257 FunFam Uncharacterized protein At5g02240 5 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00017 Rops-Chr4 527809 532885 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00017 - - psat:127108480 466.848