Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00015 ATGTTCTCTTTCTGTCATTGCCCTGAATCAGAATTCACTAGCATGGAACAAATGTTTGGAAGTTTTCTAATGAAAATGGAGGACAAGGACTGCTTCGGACAACAGGCTCAGAGAACAAAATACGATAGCCTTATTTTTGATTTAGATGATACTTTGTATCCCCTCAGTTCTGGTCTTGCAAAATGTCTTTTGCAAAATATTAAAGAGTACATGGTGGAGAAGCTTGGCATAGAACCAAGCAAAACTGATGACTTGTCAAACCTCCTGTACAAGAACTATGGAACTACTATAGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATATTACAGTTTTGTTCATGGGCGATTACCTTATGAGAACTTAAAACCAGACCCAGTTCTGAAGAACCTGCTGCTAAGCCTCCCCTATAGGAAACTTATCTTCACAAACGCAGACAAAGTCCATGCGGTTAAGGTACTTTGCAGGCTTGGATTAGAAGACTGCTTTGAAGGAATTATATGCTTTGAGACCCTTAATCCCATCCACAAGACCAATGCTTCTAATGATGAAGATGATATTGAGTTTGTGGGTTCATGGAGCTCTAATCCAACCACTAGTAATGGTGCAAGCAGCTCTCAAATCTTTGACATCATAGAGCACTTTGCTCAACCCGATCCCAGTGTAGTCTTGCCAGAGACACCAATTATCTGCAAACCATCAGAAAATGCCATTGAATTAGCTCTTAAAATAGCTAATCTTAACCCACAAAGAACTCTGTTCTTTGAGGACAGTGTCCGCAATATACAAACAGGAAAACAGGCGGGACTGCACACTGTGCTGATTGGTACATCCAAGAGTGTTAAAGGTGCTGATTATGCATTGGAAAGCATCCATAACCTTCCTGAGGCACTGCCTGAACTATGGGAGGTTGACATAAAATCAGAAGTTGCATATCCTGGGAAGCTTTCTGTGGAGACAACAAGAGTGACTGCTTGA 987 0.4103 MFSFCHCPESEFTSMEQMFGSFLMKMEDKDCFGQQAQRTKYDSLIFDLDDTLYPLSSGLAKCLLQNIKEYMVEKLGIEPSKTDDLSNLLYKNYGTTIAGLRAIGYDFDYDEYYSFVHGRLPYENLKPDPVLKNLLLSLPYRKLIFTNADKVHAVKVLCRLGLEDCFEGIICFETLNPIHKTNASNDEDDIEFVGSWSSNPTTSNGASSSQIFDIIEHFAQPDPSVVLPETPIICKPSENAIELALKIANLNPQRTLFFEDSVRNIQTGKQAGLHTVLIGTSKSVKGADYALESIHNLPEALPELWEVDIKSEVAYPGKLSVETTRVTA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00015 328 NCBIfam HAD-IA family hydrolase 231 278 IPR006439 -
Rops4g00015 328 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 35 306 - -
Rops4g00015 328 Pfam Haloacid dehalogenase-like hydrolase 233 277 IPR041492 -
Rops4g00015 328 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 36 324 - -
Rops4g00015 328 SUPERFAMILY HAD-like 40 305 IPR036412 -
Rops4g00015 328 Gene3D - 107 305 IPR023214 -
Rops4g00015 328 NCBIfam pyrimidine 5'-nucleotidase 43 277 IPR010237 -
Rops4g00015 328 SFLD C1.5.3: 5'-Nucleotidase Like 35 306 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00015 Rops-Chr4 488703 490855 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00015 K07025 - gmx:100796466 509.605