Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02398 ATGTCTACACCTTCTATTCAAGATAAGAACATTTCTTTGGTAGGGAAAAGTCCTGCTATCTCAACATCATTGTTGTCCAATCCAAGTCCTCTATCTGAAGTTACAAATGAAGAATTTGGTGTGAAAGAAATTGGACAATTGTTTGAAAAGTTCATCACCTTGGTACAGGTAGAGGAAGCCTTCAACAAAGTTTTTGGTTTGGTTCTGTTACCTTCCCTTCACTCCGAACGTGGTTTTCGAATTCGAAAGCTTTCTCTCAAGTTTGTAGGTGTTTTGATGGATGTGGAGTGGTCTGAATCGCGGTATGAGGGTAGAAATGATAGAGAGGAATCCCCTGTGAGGGACCAATATGATGATGATGGGGCAGAGAAATCTAGCAAGTATAGAAGCAAGGATAGGAAGAAGAGCGACAAGGAGCATCGGAGTAAAGACAGGGAACAGTTGAAGAGGGATTCTGAGGATGTAGAGAAGGATAGAAGGAAGAAGGAAGACAGGGATGAACGTGAAAAGGACAGGGGTAAAGATGGTAAGGCGAGGGAGAAGGATTATGATAGAGAGAAATACAGGGAAAAGGAGCGTGAGAGGGATAGAGATAAGAAGGACCGGAGTAAGGATAGGGATCGTGAGAAGGAAAGAGAGATGGAGAAAGATAGTGATAGAGCACGAGAGAAGGAGAGGGGGAAAGAGAAGACTAGGGATAGGGATAGGGATAGGGATAAGGCGAAGGAAAGGGAGCGAGAGAAGCATAGAGATAGAGAAAAGGAGAGGGAAAGCTATAGGGATGAGGACAAGGACAAGGGGAGAGATAAAATTAGAGAGAAGGAGAGGGAGACAGATCGAGATAAAGAAAGGTCAAGAGATAGAGGTAGCAGAAAGACTCTTGAGGAAGATTATGAAATAAGTAATGTTGATGGTAAAGTGGACTACCATGAAAAAAGAGATGAGGAGGTTGGCAAACAAGCAAAGGCTTCAAAGCTCGATGAAGCTGATCAAGATGGTCAAACATCAGCACATATGTCATCAACAGAACTTGAAGAACGTATCTTGAAGATGAAAGAAGCAAGGGCAAAGAAACAATCTGAAGCTGCTTCCGAGATCTCATCATGGGTTAATAGAAGCCGTAAGCTTGACAAAGAAAGAGCATTGCAGCTCTCAAAGATTTTCGAGGAACAGGACAACATTGCGGTAGAGGGAAGTGACGATGAGGAGACAACCCATCACACTGATAACCTGGCGGGGGTTAAAGTTCTTCATGGCCTTGATAAAGTTGTGGAAGGTGGGACAGTAGTTCTGACTATCAAAGATCAGCCTGTACTCGCCGATGGTGATGTTAATGAAGAGATTGATATGCTTGAGAATGTGGAAATTGGAGAACAAAAGCGAAGAGATGAAGCTTATAAAGCTGCTAAGAAGAAAACTGGCATCTATGATGATAAGTTCAATGATGACCCCTCTGTGGAGAAGAAAATACTTCCACAATATGATGATCCAGCTGCAGAAGAGGGTTTAACTTTGGATGAAAAAGGACGATTCTCTGGTGAAGCTGAGAAAAAACTTGAAGAGCTGCGAAGAAGGTTAACAGGTGTTTCCTCGAATAACTTTGAAGATCTAACTTCATCTGGAAAGGTATTATCAGATTACTACACTCATGAAGAAATGCTTCAATTTAAGAAGCCCAAGAAAAAAAAATCCCTACGGAAGAAAGATAAGCTGGACGTCAATGCCCTTGAAGCTGAAGCTATCTCTTCAGGATTGGGTGTTGGTGACCTTGGTTCTCGGAAAGATGCAAGGAGGCAAGCCATCAAAGATGAACAAAAAAGATTGGATGCTGAGATGAGAAATAATGCTTACCAGTCTGCTTATGCTAAAGCAGATGAAGCCTCCAAATTACTGCGTCTAGAGCAAACTCTCAATGTTAAAACAGAGGAAGATGAAACTCCAGTTTTTGCAGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGCAAGAAGATTAGCTCTTAAAAAGCAGGAGGAAGAAGGGGCATCTGGCCCTCAAGCTATTGCATTGCTTGCCACCTCAAATCATAGTAATGCGACTGTAGATGATCAAAACCCTACAGCTGGAGAGTCAAGAGAAAACAAGGTGGTCTTCACAGAGATGGAAGAATTTGTCTGGGGTCTCCAAATTGATGAAGAAGCACGTAAACCAGATGGTGAAGATGTTTTCATGAATGACGATGAAGAGGCAAATGTTCCTGATGAAGAAAAGAATGACGAGCCTGGTGGTTGGACTGAAGTTAAAGAAACTAATGAAGATGAACAACCCAATTCAGAAGACAAGGAGGAGATAGTTCCCGATGAAACTATCCATGAAGTTGCTGTAGGGAAAGGATTGTCAGGTGCATTGAAACTGCTTAAAGACCGAGGAACACTCAAAGAAAGCATTGAATGGGGTGGCAGAAACATGGATAAGAAGAAAAGCAAATTGGTTGGGATCGTAGATGATGAAGAAAAGGAAGTACAAAAGAAAAGGGAGATTCACATTGAGAGGACAGATGAATTTGGGAGAATTTTGACTCCTAAGGAAGCTTTTCGGATTATTTCTCATAAGTTCCATGGTAAAGGACCTGGCAAAATGAAGCAGGAAAAGCGTATGAAGCAATATCAAGAAGAATTGAAGATGAAGCAGATGAAGAGTTCAGATACACCATCACTGTCTGTGGAGAGAATGAGGGAAACTCAAGCTCGTTTGAAGACACCCTATCTTGTTCTTAGTGGTCATGTCAAACCAGGACAAACTAGTGACCCGAAAAGTGGTTTTGCTACTGTTGAGAAGGATCTTCCTGGAGGCTTGACGCCCATGCTTGGTGATCGAAAGGTTGAGCACTTCCTTGGAATTAAGAGGAAAGCTGAACCATCAAGCTCGGATACCCCGAAAAAGGCTAAATCTTGA 2937 0.4215 MSTPSIQDKNISLVGKSPAISTSLLSNPSPLSEVTNEEFGVKEIGQLFEKFITLVQVEEAFNKVFGLVLLPSLHSERGFRIRKLSLKFVGVLMDVEWSESRYEGRNDREESPVRDQYDDDGAEKSSKYRSKDRKKSDKEHRSKDREQLKRDSEDVEKDRRKKEDRDEREKDRGKDGKAREKDYDREKYREKERERDRDKKDRSKDRDREKEREMEKDSDRAREKERGKEKTRDRDRDRDKAKEREREKHRDREKERESYRDEDKDKGRDKIREKERETDRDKERSRDRGSRKTLEEDYEISNVDGKVDYHEKRDEEVGKQAKASKLDEADQDGQTSAHMSSTELEERILKMKEARAKKQSEAASEISSWVNRSRKLDKERALQLSKIFEEQDNIAVEGSDDEETTHHTDNLAGVKVLHGLDKVVEGGTVVLTIKDQPVLADGDVNEEIDMLENVEIGEQKRRDEAYKAAKKKTGIYDDKFNDDPSVEKKILPQYDDPAAEEGLTLDEKGRFSGEAEKKLEELRRRLTGVSSNNFEDLTSSGKVLSDYYTHEEMLQFKKPKKKKSLRKKDKLDVNALEAEAISSGLGVGDLGSRKDARRQAIKDEQKRLDAEMRNNAYQSAYAKADEASKLLRLEQTLNVKTEEDETPVFADDDEDLRKSLEKARRLALKKQEEEGASGPQAIALLATSNHSNATVDDQNPTAGESRENKVVFTEMEEFVWGLQIDEEARKPDGEDVFMNDDEEANVPDEEKNDEPGGWTEVKETNEDEQPNSEDKEEIVPDETIHEVAVGKGLSGALKLLKDRGTLKESIEWGGRNMDKKKSKLVGIVDDEEKEVQKKREIHIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQYQEELKMKQMKSSDTPSLSVERMRETQARLKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSSDTPKKAKS* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02398 978 Coils Coil 145 165 - -
Rops3g02398 978 Coils Coil 873 893 - -
Rops3g02398 978 Coils Coil 242 262 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 682 706 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 873 892 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 101 343 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 723 782 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 750 769 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 864 951 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 667 708 - -
Rops3g02398 978 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 229 940 IPR005011 GO:0000398
Rops3g02398 978 Coils Coil 341 361 - -
Rops3g02398 978 Pfam SART-1 family 358 825 IPR005011 GO:0000398
Rops3g02398 978 Pfam SART-1 family 836 886 IPR005011 GO:0000398
Rops3g02398 978 Coils Coil 204 224 - -
Rops3g02398 978 Coils Coil 512 532 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 101 332 - -
Rops3g02398 978 MobiDBLite consensus disorder prediction 959 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02398 Rops-Chr3 49001127 49017323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02398 K11984 - gmx:100793984 1300.8