Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01682 ATGGCATTTTTTAACACTCCCTTCACAGTATTTTTGTTCCTCTCTCTCCTCCTCCTCCTCTCTTCTTCACTTTCTCTCTCCTCCTCCATTCATGACCTTCTCCGTTCAAAAGGGTTACCAGCTGGTCTTTTACCTGAAGAGGTAAAATCCTACACTTTCTTAGAAGATGGTCACTTGGAAGTGATCCTCAATGCACCTTGCTTAACCAAGTATGAGAACAGGGTCTACTTTGAACGTGTGGTCACTGCTAACCTCACCTATGGTAGTCTCATAGGTGTGGAGGGTCTTCAACAAGAGGAGCTTTTTGTGTGGCTACCTGTTAAGGATATCATAGTTGATGATCCATCATCAGGGTTGATACTATTTGACATTGGTCTTGCTTACAAGCAACTTTCTCTCTCTCTTTTTGAAGATCCACCTCATTGCAAACCCGAAGGTGGGCTGAGGAATCATGTGAGGAAGGGGAAAGGATTCGAGTCTCTGAGGTGTAGAGGGTTGAGGTTGGTTGAGACCATGTAA 519 0.4432 MAFFNTPFTVFLFLSLLLLLSSSLSLSSSIHDLLRSKGLPAGLLPEEVKSYTFLEDGHLEVILNAPCLTKYENRVYFERVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAYKQLSLSLFEDPPHCKPEGGLRNHVRKGKGFESLRCRGLRLVETM* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01682 172 Gene3D - 18 142 IPR036758 -
Rops3g01682 172 SUPERFAMILY At5g01610-like 8 144 IPR036758 -
Rops3g01682 172 PANTHER T31J12.3 PROTEIN-RELATED 20 143 IPR007493 -
Rops3g01682 172 Pfam Protein of unknown function, DUF538 31 137 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01682 Rops-Chr3 27452210 27453719 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01682 - - ccaj:109817891 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01682 3 27452210 27453719 Rops3g01682 3 27452210 27453719 ECH