Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01676 ATGCAAACCACGTTGCCCTCTGATTCCAACGGCCGGGAAACAGATTTCCGGTCACCGCTGCTACCGCCGGCCGGTGAGTCCGAACCGGAGAAACAGTGCATCGACGAGATGCTTCAGAATTATTGCGGCGAGTTTGGGAGGTGGCAATTGAAACACTTCGTTCTCACGAGCCTCGCGTGGGCCTTAGAAGCTTTCCACACAATGGTTATGATCTTCGCGGATCGCGAACCGGAGTGGAGATGTGTCGATGGTGCTTCCGGTTCGGGTTGTGACTCGGCCGCGAAGAGCGTGTGCCGGTTCGAACCGGGTTCGTGGGAGTGGGTTGGAGGTACTGCTTCGTCTACGGTTGCGGAATGGGGTTTGGTTTGTGGTGAGAAGTTTAAGATTGGGATGGTTCAAGCCGTGTTCTTCGGTGGCTGTATGATCGGTGCTGGAATATTTGGTCACCTCTCAGACTCATTTCTAGGGAGAAAAGGCTCTCTCACAATAGTTTGCATCCTAAACACCATCTTTGGCACCTTAACAGCATTCTCCCCTAACTACCTCTCCTATGTCATCCTTCGCCTCCTCACCGGCTGCAGCACCGGTGGCGTCGGCCTCTGTGCCTTCGTCCTCGCCACAGAGCCAGTGGGCCCCACAATGCGCGGCGTCGCCGGCATGTCCACCTTCTACTTCTTCTCCTCCGGCATTGCACTACTCTCAGGCATAGCCTACGCCTTCCCAACATGGCGAAACCTTTACATAGCTTCCTCCATGCCCTCCCTTCTTTTCCTCCTCATCATCCTTCCCTTCATCTCAGAGTCCCCAAGATGGTACCTTGTTAGAGGAAGAGTCAAAGAAGCAATGGAAATCATGTCCACCATTGCTTCCTCCAATGGTAACCACCTTCCACAAAGGGTTCTTCTAACCCTAGATGAAGAATCATCATCACCATTGCCACCATCATCGTCATGTTCATCCAATAACATAAAACACTCAAAAGATAACAAAAACGCCGTGACGAGTTCTCTAGTGGACGTGATTCGTTCACCGGTAACACGCATGCGTTTGATTTTGGCAGTGATTATTAACTTCATGTGCTCTGTGGTGTACTATGGATTGAGTTTGAACGTGGTTAACCTTGAAACAAACCTTTACCTTACCGTGATACTCAACGCGGTGGCAGAGATGCCGGCGTTCATGATAACGGCGATGTTGTTGGACAGATTAGGGAGGAAGCCATTAACGGTGGGGACATTATGGTTCAGTGGGTTATTTTGCTTTTTAGGGAGTTTGATGAGGAACGTTGGGGTGTGGAAAGGGGTGAGAATGATGTGTGGTATTTTGGGGATTTTTGGTATGGCGGGGACTTATAACTTGTTGTTTATTTACACGGCGGAGCTGTTCCCGACGGTGGTGAGGAACGCCGCGTTAGGGTGTGCAACACAGGCGGCGCAGATGGGTGCAATATTGGCGCCGGTTGTTGTCGTTTTGGGTGGGTCGTTGCCGTTTGTGGTGTTCGCATTGTGTGGAATTGTTGGTGGGTTGTTTGCGTTTTACCTGCCGGAGACGCTAAACCAGCCACTATATGATACATTAACCGGAATGGAGGCAGGGGAAAATGTTGGCTACACAATCAACCGTGTTTGA 1629 0.5089 MQTTLPSDSNGRETDFRSPLLPPAGESEPEKQCIDEMLQNYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADREPEWRCVDGASGSGCDSAAKSVCRFEPGSWEWVGGTASSTVAEWGLVCGEKFKIGMVQAVFFGGCMIGAGIFGHLSDSFLGRKGSLTIVCILNTIFGTLTAFSPNYLSYVILRLLTGCSTGGVGLCAFVLATEPVGPTMRGVAGMSTFYFFSSGIALLSGIAYAFPTWRNLYIASSMPSLLFLLIILPFISESPRWYLVRGRVKEAMEIMSTIASSNGNHLPQRVLLTLDEESSSPLPPSSSCSSNNIKHSKDNKNAVTSSLVDVIRSPVTRMRLILAVIINFMCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITAMLLDRLGRKPLTVGTLWFSGLFCFLGSLMRNVGVWKGVRMMCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPVVVVLGGSLPFVVFALCGIVGGLFAFYLPETLNQPLYDTLTGMEAGENVGYTINRV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01676 542 MobiDBLite consensus disorder prediction 307 327 - -
Rops3g01676 542 ProSitePatterns Sugar transport proteins signature 1. 396 412 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops3g01676 542 MobiDBLite consensus disorder prediction 1 29 - -
Rops3g01676 542 SUPERFAMILY MFS general substrate transporter 126 522 IPR036259 -
Rops3g01676 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 45 525 - -
Rops3g01676 542 Pfam Sugar (and other) transporter 125 523 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops3g01676 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 519 IPR020846 GO:0022857
Rops3g01676 542 Gene3D MFS general substrate transporter like domains 104 525 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01676 Rops-Chr3 27242071 27246988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01676 6 534 Organic Solute Cotransporters AT3G20660 67.542 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01676 K08202 - gmx:100814182 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01676 3 27242071 27246988 Rops3g01676 3 27242071 27246988 ECH