Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01625 ATGTCAGAGCGAGACAGAGATTGGGATTTTCACCTTCGAACGCTTTCTTTTAGTGCCAGAGACTCCAACACCGCTAACGATCCCGCTTCCGATCCCTCCCTTCTTCAATCCGTGAAGAAGCTTCATGAATTATGCAAGGTAGAGAATTCTGAGGACTTGGTAGCTAGGGTTTATCCACAGATTAACAAAATTTTCCAGCGTGCTGTGGCTTCCCTTTCCCAATCTAGAACCTCCAATGGCCTTCTTTTACTCGCAATTCTTCAATTTTACCTAGACTTTGGAGAGGTGGTTCTTCATGATGCTGATCCTAATCTTAGGACATTTTTTCGTTCGTGCTTGAGCAGGGAGTTTGCAGATCCTGTTGTTGCAGAAGCAGTGCTTGAATTTCTCATTATCAACAAGAAGAAGCTTTTAACTTCCTTCCCTAACTTATTGCCTCAGTTTTTTCCATTGTTGTTAAAGCTGATAGCTTGGAATGGTGAAAGATTAGAGAAACTATTTTTGAAAGTCTTCCCGGGATTGATGTCGCCTGGGTCATTTATTCCATTATTTCCATCTTTACTGGACCTGCCAATTTTGGTGGTGTCATTGGAATTAGTGGAAAAAAGCTCAGGACCACTAATTGGAAGCAGCATTGCTTCAATTCAGAAAAATACTGCTCCTAAGATGCTTCTTGCCCTTATGGATGAAGCATATACTGGTTCAACTATAGAAGATGGTGGAGGAGATTCTGAATCTGAGGATAGCAGTGCAATTGATGTTGCTGATCCTTTGTTCCTTGAGCTTTTAAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCGTCTCCAGTGATGACCACACTATTGCAAGCTGCAGTCAATAATCCTTACTCTGATAGGCTGAATGCAGTACTCAACATGGCACCTCGTCTTCTTGATGCGTACTTCTCCATAGCATTGCGTGATGTCAATGATTCTTTGATCTGTGCATTGATTCCCCTACTGATGTCAAGATTTGCTACAATGTTTCCAGACAAAATATTTTCTTATGAGATTCGTAAGCGGCTTTTGGAATTTATGCTCTCTACATTTCAGCGCTCCCCAAACATCATTGCCCTATTAAAGACAGATTGTGAGATCGTTAAGATTGCAAACTCAAGACTGGGAGAAGCTTATGACAGCCCAGACAAGACAGAATTGGCATTGCAATTATGTTGGGCCATTGGAGAGCATGGTGGCGGTGGTGGATCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTTTAGAACTACTTCTGTATGAAAACCTTTCCTCAAGTCGTCTTGGCATGACGCAGGAGGTATCCCTTAGTTCTGATAAGGATACCTACAGAAGGTCATCACAGTCCAGGCTTTTATGTTTTGTGGTAACTGCCATTGCAAAGCTCGCTACACATCATCGTGAATTACTACCAAGAGCACGTGTATCCTTGGGCAAGGTGGCTCGATCTCGAATTTCAGATACGAGAGTATGGAGACGTGCATGTGATTTCCTGGGTTTGATGAAAGACCCTGCTATTTGTTCTTCCATACTGGGGCCTTCACGATCTTCACAAGGCACCACACAGAAAATCGGCAGCATAAACTGGAATGTAGGTGCAACAAAGATGATCGCACATATTCCGTTTTACATTCTAGGTGAACAAGAAGGACCACCATTTCATGATTTCTCTTTCTCAGATATCCTTTCATGA 1719 0.4264 MSERDRDWDFHLRTLSFSARDSNTANDPASDPSLLQSVKKLHELCKVENSEDLVARVYPQINKIFQRAVASLSQSRTSNGLLLLAILQFYLDFGEVVLHDADPNLRTFFRSCLSREFADPVVAEAVLEFLIINKKKLLTSFPNLLPQFFPLLLKLIAWNGERLEKLFLKVFPGLMSPGSFIPLFPSLLDLPILVVSLELVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGGGDSESEDSSAIDVADPLFLELLKDENDGIAERPWSSPVMTTLLQAAVNNPYSDRLNAVLNMAPRLLDAYFSIALRDVNDSLICALIPLLMSRFATMFPDKIFSYEIRKRLLEFMLSTFQRSPNIIALLKTDCEIVKIANSRLGEAYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRLGMTQEVSLSSDKDTYRRSSQSRLLCFVVTAIAKLATHHRELLPRARVSLGKVARSRISDTRVWRRACDFLGLMKDPAICSSILGPSRSSQGTTQKIGSINWNVGATKMIAHIPFYILGEQEGPPFHDFSFSDILS* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01625 572 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
Rops3g01625 572 SUPERFAMILY ARM repeat 31 508 IPR016024 -
Rops3g01625 572 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 1 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01625 Rops-Chr3 25252176 25263192 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01625 K19025 - gmx:100796067 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01625 3 25252176 25263192 Rops3g01625 3 25252176 25263192 ECH