Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01624 ATGAGAAGGGAGTGTCATCCATTGTTGAAAGGAGGGAGAAAGGATAGAAAATATAGGCATGGATTTTCTGCTGCTGAGATGGAGTCACTGGCAAGCATATGTGAGGTTGTGCTGCCTCCTTTGCCAATAGATTCTCTCAACAACACAAAAGAAGACCAAACTGATGATGTGCAATCCTTCTGGATCACTTCTGCTTCTAGCTATCCAATCCATGAGGTTGCAGAGAAATTAGTGAAAAGTGGCAATATAGGAGCAGTGATACTGATTAGAGTGGTTTTATGGCTGTTGGCAACGAGGTTGGGCACCTTGTTGATCTGTGGTTTGCTCTGTCTTACTGAGAAATGGCCCTTCATCAACAACTTCTCAAGCATATCTTTGGAGAAAAGAGAAAAGGTTATGCAGAGGTGGCTGAAGCATAGGTTCCTCACACCTATTAGACTCGCATTTGCTTACATCAAAAGCTTATGCCTCTTTATTTTTTTCTCCTGGGTTGATGAAACTGGGGATAACCCTGCGTGGAAAGCCATTGGATATGAGGTAGCAGCTGATGAGAAATGGACCAATATCTCTAACAGGAGGCCCCTTGAAAAGGGGATTATAGAAACCATGTATGAATCTGGCTCAACTCTTCAACAATCTCTTGCTGCGAAAGGCCTCAATGCTACACTAGATACCAAAAGCAATATCATCAAAGTCAAATGTGATGCACTTATTGTAGGGTCTGGTTGTGGTGGAGGTGTTGCAGCTGCTGTTCTTTCAGGTGCTGGCCACAAGGTGATAGTTCTAGAGAAAGGCAACTACTTTGTTCCCCAGGATTTTTCTTCTCTAGAAGGGCCTTCCATGGATCAATTATATGAAAGTGGAGGGAACCTTGCTTCTGTGGACTCCAGAATTATAGTTTTGGCAGGATCAACAGTAGGTGGTGGCTCTGCTGTTAATTGGTCTGCATGCATCAAAACACCACACAAAGTGCTAAAAGAATGGTCTGAGGACCACAAGCTTTCCCTCTTTTCAAGCCCAGAATATCTCTCTGCCATGGAAACTGTGTGTGAAAGGATTGGTGTCACAGATAATTGTACAGAGGAGGGATTCCAAAATCAAGTGCTAAGAAAAGGGTGTCAAAATCTTGGGCTCAAAGTTGATTATGTGCCAAGAAATTCATCAGGGAATCATTACTGTGGTTCATGTGGTTATGGTTGTCCAAAAGGGGAGAAACAAGGGACTCAAACTACATGGCTTGTAGATGCTGTCGACAAAGGTGCTGTAATAATAACAGGATGCAAAGCTGAGAGGTTCTTGTTGAAAAGTAACAGGAGTGGAAATGGCAGAAAGAAGAAATGCATGGGAGTGATGGCAAAAGCTTTAAGCAACAAAGTCACAATGAAGCTGCAAATAGAGGCCAAAGTGACCATTTCTGCAGGTGGGGCACTTCTGACACCCCCATTGATGATCTCTAGTGGGTTAAAGAATAAGAATATTGGGAGGAACCTTCATCTTCACCCTGTGCTAATGACATGGGGATACTTTCCAGAATCAATTTCAGAGTTCAAAGGTAAAGTCTATGAGGGAGGTATAATCACATCAGTCCATAAGGTGCCATCAGGAAACTCAAAATCAGATGCAAGAGCCATAATTGAAACACCGTTGCTAGGACCAGCAACCTTTGCTTTACTATGCCCTTGGGAATCTGGACTTGACTTCAAAGAAAGAATGCTAAAATACCCTAGAACTGCCCATTTGATCACAATAATCAGAGACATGGCTTGTGGGCAAGTAACATCAGAGGGAAGGATCAGCTATAAATTGAATGCAATTGACAGAGAGAACATGAGGGCTGGCTTGCAGCAAGCATTGAGGATTCTAATAGCAGCAGGAGCAGTTGAAGTAGGCACCCACAGAAGTGATGGTCAGAGAATCAAGTGCAGTGAGATTAGTGAAAATGAAGTGGAAGAGTTCTTAGACAGTGTGTGTCCAATGGAGGGAGCACTATCACCAGGTGAGAATTGGAACATATATAGTTCTGCACATCAGATGGGAAGCTGCAGAATGGGAGTGAATGAAGAAGAAGGTGCAGTTGATGAAAATGGGGAGACATGGGAGGCAGAAGGCTTATTTGTTTGTGATGCAAGTGTACTTCCAACTGCTGTTGGTGTCAATCCCATGATCACAATCCAGTCAACTGCACACTGTATCTCAAATAGAATTGTAGATTACCTTAAAAAGGGTCAAATATCAAAAGTCTGCTGA 2247 0.4295 MRRECHPLLKGGRKDRKYRHGFSAAEMESLASICEVVLPPLPIDSLNNTKEDQTDDVQSFWITSASSYPIHEVAEKLVKSGNIGAVILIRVVLWLLATRLGTLLICGLLCLTEKWPFINNFSSISLEKREKVMQRWLKHRFLTPIRLAFAYIKSLCLFIFFSWVDETGDNPAWKAIGYEVAADEKWTNISNRRPLEKGIIETMYESGSTLQQSLAAKGLNATLDTKSNIIKVKCDALIVGSGCGGGVAAAVLSGAGHKVIVLEKGNYFVPQDFSSLEGPSMDQLYESGGNLASVDSRIIVLAGSTVGGGSAVNWSACIKTPHKVLKEWSEDHKLSLFSSPEYLSAMETVCERIGVTDNCTEEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQTTWLVDAVDKGAVIITGCKAERFLLKSNRSGNGRKKKCMGVMAKALSNKVTMKLQIEAKVTISAGGALLTPPLMISSGLKNKNIGRNLHLHPVLMTWGYFPESISEFKGKVYEGGIITSVHKVPSGNSKSDARAIIETPLLGPATFALLCPWESGLDFKERMLKYPRTAHLITIIRDMACGQVTSEGRISYKLNAIDRENMRAGLQQALRILIAAGAVEVGTHRSDGQRIKCSEISENEVEEFLDSVCPMEGALSPGENWNIYSSAHQMGSCRMGVNEEEGAVDENGETWEAEGLFVCDASVLPTAVGVNPMITIQSTAHCISNRIVDYLKKGQISKVC* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01624 748 Pfam GMC oxidoreductase 597 730 IPR007867 GO:0016614
Rops3g01624 748 Gene3D - 219 527 IPR036188 -
Rops3g01624 748 SUPERFAMILY FAD/NAD(P)-binding domain 233 742 IPR036188 -
Rops3g01624 748 PIRSF Lg_Ch_AO 8 745 IPR012400 GO:0046577
Rops3g01624 748 Gene3D - 657 738 IPR036188 -
Rops3g01624 748 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 18 743 - -
Rops3g01624 748 Pfam GMC oxidoreductase 235 502 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01624 Rops-Chr3 25211148 25219295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01624 75 742 Acyl Lipid Metabolism Gene Families AT3G23410 63.447 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01624 K17756 - gmx:100776182 1249.57