Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01552 ATGGGTTCAATGCTAGTACATTCCCTGTTCCTAACTCTGTTTCTGTTTTCCCACCAAACAAAAGCTGAAATTTTTGACTCCTTCAGTAATGCAACCAGTTTCAGAAGCAGGAATCTTGCAGGAACATGCAACTGGTTCCGTGGCAAATGGGTTTATGATGCTTCATATCCTCTCTATGACCCTTCTACTTGTCCCTTCATAGATCCACAATTCAACTGCCAAAAGCACGGTCGTCCAGATAAACAGTACCAAAAATATAGGTGGATGCCATTTTCTTGTCCCTTGCCAAGGTTCAATGCATTGAACTTTCTGAATGGTTATAGAGGGAAGAAGATTATGTTTGTTGGTGACTCATTGAGCTTAAATCAGTTCAATTCATTGGCATGTATGATTCATGCTTGGGTACCAAAATCCAAGACCACATTCAGACAAAGGGATGCTCTCTCCTCAGTGACATTTGAGGACTATGGCCTTGAGTTATTTCTTTACCGCACAGCATACTTGGTCGACCTTGATCACGAGAAAGCTGGAAGAGTTTTGAAGCTTGATTCAATCAAGAATGGTGATGCTTGGAGAGGAATGGACGTGCTGATCTTCAACACGTGGCATTGGTGGACCCACACTGGAAGTGCACAACCATGGGATTATGTTCAGGAGAATAATAGGTTGTACAAAGACATGAACCGTTTTGTTGCATTCTATAAAGGGCTAACAACTTGGGCTAGATGGGTTGAAAAGAATGTTAATCCAGCACAAACCAAGGTCTTCTTTTTAGGAATTTCTCCTGTACATTACCAGGGGAGAGATTGGAATCAACCAGCAAGATCATGCATGAGTGAGACACAACCATTCTTTGGTTTGAAGTACCCTGGAGGGACACCAATGGCTTGGGTGGTGGTGAACAAGGTATTGAGAAGGATGACTAGGCCAGTGTATTTCTTAGATGTGACCACACTCTCACAGTACAGAAAAGATGCACACCCTGAAGGTTATAGTGGGGTTATGGCAACAGATTGCAGCCACTGGTGTCTTCCAGGACTTCCTGATACTTGGAATGAGCTTCTGTATGCAGCACTTTCTGGTTGA 1086 0.4309 MGSMLVHSLFLTLFLFSHQTKAEIFDSFSNATSFRSRNLAGTCNWFRGKWVYDASYPLYDPSTCPFIDPQFNCQKHGRPDKQYQKYRWMPFSCPLPRFNALNFLNGYRGKKIMFVGDSLSLNQFNSLACMIHAWVPKSKTTFRQRDALSSVTFEDYGLELFLYRTAYLVDLDHEKAGRVLKLDSIKNGDAWRGMDVLIFNTWHWWTHTGSAQPWDYVQENNRLYKDMNRFVAFYKGLTTWARWVEKNVNPAQTKVFFLGISPVHYQGRDWNQPARSCMSETQPFFGLKYPGGTPMAWVVVNKVLRRMTRPVYFLDVTTLSQYRKDAHPEGYSGVMATDCSHWCLPGLPDTWNELLYAALSG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01552 361 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 95 357 IPR026057 GO:0016740
Rops3g01552 361 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 17 355 IPR029962 GO:0016413
Rops3g01552 361 Pfam PMR5 N terminal Domain 42 93 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01552 Rops-Chr3 23657374 23660747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01552 - - gmx:100786668 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01552 3 23657374 23660747 Rops3g01552 3 23657374 23660747 ECH
Rops7g01055 7 14029043 14032574 Rops3g01552 3 23657374 23660747 PCT