Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01431 ATGGACAACTTTGAAGATGTTACAGAGCCAGTTAGTCCAAGTGGAAGATACTTCAACACCCCATTGCTATGTGCATATATTTTTGGTTTTTTAGAATCAGAAGTTCCAATTGATGACTCTCAAGCTAAGTATTTGTTTGAAGATGTGTTTCTACCTATCAATCCACGCTTCTCCTCCATCATGGTGAGAGATGAAGATGGCACAATGAAGTGGAAAAAAGTAGAGGTGAAGCCTGAAGAGCATATGAAGTTTCCCATATTTCCCAAAAATGAGTCATTGGAATTGTATGATCAATATTTTGATGAGTATGTGTCAAGGATATTAATGGAAAGGACCCCTCAGGATAAACCACTTTGGGAAATTCATGTGATCAAATATCCAACAAGTAATGCTGCTGGCACCATGATATTCAAACTTCACCATGCACTTGGAGATGGTTATTCCCTCATGGGTGCTCTTCTTTCTTGTCTTCAAAGAGCTGATGACCCTTCACTTCCTCTATCCTTTCCTTCACGCAAACCATCACAATCATCATCTTCTAACAAAGGCTTCTTCAAGTGGTTCCCTTCAACCATGTTTTCATTTTTCAACTCCATCTCAGATTTTGGATGGAGCATAGTGAAAAGTTCAATAATTGAGGATGATAAGTCACCTATAAGGAATGGTGAGGAAGGTGTTCAGTTTCAGCCATGTGTTCTATCAAACCTATCTTTCTCTCTGGATCAAATAAAACAAATCAAGTCCAAGCATGGAGTGACAATAAATGATGTGATTACTGGGGTAATTTTCTATGGGATTCGGCTATACATGCAAGAGATTGACAATAAGGCAAGAAGCACAAATGCCACTGGATTGGTGTTGCTTAGTACAAGGAACATTGGAAGTTACCAGTCAGTCCAAGATATGATGAAGGCTGATTCAAAATCTCCTTGGGGGAATCATATTTCTTTCTTACATGTATCAATACCCAAGCTAAGCCAAGCAAGCCTATCCAACCCTCTTGAATTTGTTTGGAAAGCTCAAAAAATAATCAAGAGGAAGAGAAATTCTTTCACTGTTTTTCTTATTGAGTGGCTTTTAGATATGGAGCTAAAATTAAGAGGACACGAGGCAGTTGCTAAACATATCTATGGTACATTGAGAAACTCAAGTGTTGTCATATCCAACTTGATTGGGCCAGTGGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTACTTTACAATGAGTGGTGGACCTGAGAGTATAAATATTGCGGTTATGAGCTATACAAGAACATTAAGAATTACCTTGAAAACACACAAAGGCTTTATTGATGAGCACAAGTTCAAATTCTGCATGGTAAAAGCCTTTGAGGTCATATCCAAAGCATCAATGGAGATCCCCAACAAAAGCAAAGGTTAA 1410 0.3844 MDNFEDVTEPVSPSGRYFNTPLLCAYIFGFLESEVPIDDSQAKYLFEDVFLPINPRFSSIMVRDEDGTMKWKKVEVKPEEHMKFPIFPKNESLELYDQYFDEYVSRILMERTPQDKPLWEIHVIKYPTSNAAGTMIFKLHHALGDGYSLMGALLSCLQRADDPSLPLSFPSRKPSQSSSSNKGFFKWFPSTMFSFFNSISDFGWSIVKSSIIEDDKSPIRNGEEGVQFQPCVLSNLSFSLDQIKQIKSKHGVTINDVITGVIFYGIRLYMQEIDNKARSTNATGLVLLSTRNIGSYQSVQDMMKADSKSPWGNHISFLHVSIPKLSQASLSNPLEFVWKAQKIIKRKRNSFTVFLIEWLLDMELKLRGHEAVAKHIYGTLRNSSVVISNLIGPVEPMALANHPVKGLYFTMSGGPESINIAVMSYTRTLRITLKTHKGFIDEHKFKFCMVKAFEVISKASMEIPNKSKG* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01431 469 Pfam WS/DGAT C-terminal domain 311 456 IPR009721 -
Rops3g01431 469 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 8 462 IPR045034 GO:0008374|GO:0045017
Rops3g01431 469 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 100 188 IPR004255 GO:0004144|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01431 Rops-Chr3 21332965 21336433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01431 9 462 Acyl Lipid Metabolism Gene Families AT5G53390 28.330 7.15e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01431 - - gmx:100816273 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01431 3 21332965 21336433 Rops3g01431 3 21332965 21336433 ECH