Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01429 ATGGAGCTCACTATTACACAACCTGATGATTGGCATCTTCACCTTCGTGATGGCTCCCTTCTTGAAGCTGTCATCCCTCATAGTGCAAGGCATTTTGGAAGGGCTATAGTGATGCCAAATTTGAAACCACCCGTCACTACCACAGCCGCTGCTGTTACTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAAATAGCAACTTCACTCCTCTGATGACGCTTTATCTAACAGACATGACAACTCGTGAAGAGATTAAACTTGCAAAAAGAAGTGGACATGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACAACAAATTCCCAAGATGGTGTTACAGATCTTTTTGGAAAATGTTATTCTGTTCTTGAGGAAATGGTTGAGCAAGATTTACCATTATTGGTTCATGGAGAGGTTACAGATCCACTAGTTGATATTTTTGACCGGGAAAAGGTCTATATTGAAACAATTTTAGAGCCTTTAATTCAAAGGCTTCCACAGCTGAAGGTTGTGATGGAGCATATTACTACCATGGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTATGTAGCAGCAACTGTTACACCACAGCATCTTCTTCTCAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGCCTTCCAGTGCTCAAAAGAGAGATCCACAGACAGGCTATTGTTTCAGCTATCACTGCTGGAAGTAAACGATTCTTCCTTGGAACTGATAGTGCTCCACATGATAGGCGTAAAAAGGAATGTCCCTGTGGATGTGCTGGCATATACAACTCCCCGGTTGCTCTATCACTATATGCCAAGGTTTTTGAAGAGGCTGGTGCACTTGACAAGCTGGAGGCTTTTACAAGCTTTAATGGACCTGGCTTCTATGGCCTCCCCAGAAACAAGAATAAGATTAAACTGAGGAAAGCTCCTTGGAGAGTACCTGAGTATTTTTCATTTCCATGTGGAGATATTGTCCCCATGTTTGCTGGTGAAACACTTGAATGGGAGGCAGTGCTTAATTGA 1041 0.4207 MELTITQPDDWHLHLRDGSLLEAVIPHSARHFGRAIVMPNLKPPVTTTAAAVTYRESILKAIPKNSNFTPLMTLYLTDMTTREEIKLAKRSGHVYGVKLYPAGATTNSQDGVTDLFGKCYSVLEEMVEQDLPLLVHGEVTDPLVDIFDREKVYIETILEPLIQRLPQLKVVMEHITTMDAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITAGSKRFFLGTDSAPHDRRKKECPCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPGFYGLPRNKNKIKLRKAPWRVPEYFSFPCGDIVPMFAGETLEWEAVLN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01429 346 PIRSF Dihydroorotase 1 346 IPR004721 GO:0004151|GO:0019856
Rops3g01429 346 PANTHER DIHYDROOROTASE 1 343 IPR004721 GO:0004151|GO:0019856
Rops3g01429 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Rops3g01429 346 FunFam Dihydroorotase 1 344 - -
Rops3g01429 346 Gene3D - 1 344 - -
Rops3g01429 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Rops3g01429 346 Pfam Amidohydrolase family 10 315 IPR006680 GO:0016787
Rops3g01429 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Rops3g01429 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Rops3g01429 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Rops3g01429 346 NCBIfam dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01429 Rops-Chr3 21246584 21252708 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01429 K01465 - gmx:100815210 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01429 3 21246584 21252708 Rops3g01429 3 21246584 21252708 ECH