Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01426 ATGGACAAAGAGTTCTCCACTATTCCGGCCACTTCCCGGAGCTCCGACGAGGTCAGTTTTGCTGATACGGTTTTTGGATTTTGGGAGGATTTTCAGGACTCACCGGAAAAATCATCCAACTCCGGCACCGATGGTGATGAACAGGATGAGAGCTTTTGTACTGTGGAAAAGAATAAAGCTTTCTGGGAAGAACAAGAACAGCTTCTCAAGACAACTTTGTGTAGGACTAGCTCTCGTGAGACAAAAGTTAGGCAAGCTACAAAGGAGGCTCTAAGAGAATTGAACATATCGGAGATGCTGTGTATTTGCCGGCGACCGGTGGTGGCTAAGAGCTGCCGGAAATGTTTGATGAGAGAAGTATGCGATCGATTATTGAACCTTGGCTACAATTGTGTCATTTGCAAATCTAAATGGAGAAGTTCATCAGAAATCCCATCAGGAGAGCATACATATTTGGAAGTGACGGATAATTCATCAAATGCCAAAAGAGGGGTTGTAAAAGTGGTAATTGAATTGAATTTTCGAGCTGAATTCGAGATGGCACGAGCTAATGAAGAATACAACCAATTAATTAAGCAATTACCCGAAGTATTTGTTGGAAAAGCAGAGAGGTTAAGAGTATTGGTTAAGATAATGTGCTCAGCTGCTAAAAAATGCATGAAGGAGAAGAAAATGCACTTAGGGCCATGGAGGAAACAAAAGTACATGCAAGCTAAGTGGTTTGGCACATGCGATGGGTCCAAAATGGAACCACTTCCCAAAGTGTACTCAACAAGGCCACCAAAACCTAAGGCTTCATTGCTCACTTGCGATTTAATAGAAAACATTCCCGGATTGCAATGTACTGCAGTTGAGGTTGTATGA 864 0.4248 MDKEFSTIPATSRSSDEVSFADTVFGFWEDFQDSPEKSSNSGTDGDEQDESFCTVEKNKAFWEEQEQLLKTTLCRTSSRETKVRQATKEALRELNISEMLCICRRPVVAKSCRKCLMREVCDRLLNLGYNCVICKSKWRSSSEIPSGEHTYLEVTDNSSNAKRGVVKVVIELNFRAEFEMARANEEYNQLIKQLPEVFVGKAERLRVLVKIMCSAAKKCMKEKKMHLGPWRKQKYMQAKWFGTCDGSKMEPLPKVYSTRPPKPKASLLTCDLIENIPGLQCTAVEVV* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01426 287 NCBIfam uncharacterized plant-specific domain TIGR01615 118 245 IPR006502 -
Rops3g01426 287 Coils Coil 173 193 - -
Rops3g01426 287 Pfam PDDEXK-like family of unknown function 22 244 IPR006502 -
Rops3g01426 287 PANTHER OS03G0796600 PROTEIN 14 255 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01426 Rops-Chr3 21190780 21193761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01426 - - tpra:123916511 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01426 3 21190780 21193761 Rops3g01426 3 21190780 21193761 ECH