Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01422 ATGATGGCTGGAAATGGTTTGTTTTATCCCATTTTTGGTTTTGCATCACTTGTGCTTTTCATTTACATGTCTTTTGGAGATGTAAGGTTTGGTTTTGAGGAAGAAAGAGAATTGGCTTTTGTGGAGAGAAATGGGACTCAGTTTATGTTGGATGGGAAAGCGTTTTACATTAATGGTTGGAACTCTTATTGGTTAATGGTTCAATCTGTGGATGATTATACAAGGCCTAGGGTACGTGAAATGCTGAAAGCTGGGGCCAAGATGGGTCTCACTGTTTGTAGAACATGGGCATTTAATGATGGTGACTATAATGCCCTTCAAACTTCCCCTGGTGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTACGTTCTAGCAGAAGCAAGGCGACATGGAATTAGGCTGCTACTTTGCTTAGTAAATAACTTGCAAGCATATGGTGGGAAGACTCAGTATGTCAAATGGGCGTGGCAAGAAGGAGTAGGGTTAAGCTCATCTAATGATTCTTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAAAATTACGTCAAGACTATTCTGACAAGGAAGAATACTATTACTGGAATTGAATATAGACATGACCCTGTCATTTTTGGTTGGGAATTGATTAATGAACCTCGGTGTATAACTGATCCTTCTGGTGACACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAATCGATCGACAAGAGCCATCTGGTGACCATTGGACTTGAAGGTTTTTATGGTCCTAATGACCCAAAAAGGTTGACTGTCAACCCTGAGGAGTGGGCATCAAGACTTGGATCTGATTTTATCAGGAACTCCGAAATCTCAAATATTGACTTCACCTCTGTCCATATCTATCCTGATCATTGGTTTAAAGAGCAAGTATTTGAAGACTATATGAAATTTCTCTCCAAGTGGATGGTTTCTCACATTGAAGATGGTGACAAGGTATTGAAGAAGCCAGTCTTGTTCTCTGAATATGGATTATCGGACACAATCAAGAACTTTTCAGTGTCTCACCGAGAAAAGATGTATAAAACAATTTTGGACATAACCTACAAATCTGCTAAGAAAAACAGGTCTGGAGCTGGTGCTTTGGTTTGGCAATTCTTAGTTGGAGGAATGAATGAGTTCATTGATGACTTTGGGATGGTCCCATGGGAAAGGTCATCATTCTATTCACTATTTATAGAACAATCATGCAGATTAGCCAAGGTCAAGGGATGGACTCAACAAGGCATAAGTTTCAAACAATTTTGTTAA 1284 0.3941 MMAGNGLFYPIFGFASLVLFIYMSFGDVRFGFEEERELAFVERNGTQFMLDGKAFYINGWNSYWLMVQSVDDYTRPRVREMLKAGAKMGLTVCRTWAFNDGDYNALQTSPGVFNEQAFKALDYVLAEARRHGIRLLLCLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFYDPSIRSYFKNYVKTILTRKNTITGIEYRHDPVIFGWELINEPRCITDPSGDTLQDWIEEMSAFVKSIDKSHLVTIGLEGFYGPNDPKRLTVNPEEWASRLGSDFIRNSEISNIDFTSVHIYPDHWFKEQVFEDYMKFLSKWMVSHIEDGDKVLKKPVLFSEYGLSDTIKNFSVSHREKMYKTILDITYKSAKKNRSGAGALVWQFLVGGMNEFIDDFGMVPWERSSFYSLFIEQSCRLAKVKGWTQQGISFKQFC* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01422 427 PANTHER - 12 417 IPR045053 GO:0004553
Rops3g01422 427 Pfam Cellulase (glycosyl hydrolase family 5) 73 376 IPR001547 GO:0004553|GO:0071704
Rops3g01422 427 Gene3D Glycosidases 37 414 - -
Rops3g01422 427 FunFam Mannan endo-1,4-beta-mannosidase 6 37 414 - -
Rops3g01422 427 SUPERFAMILY (Trans)glycosidases 40 402 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01422 Rops-Chr3 21126751 21131729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01422 3 415 Glycoside Hydrolase AT2G20680 70.460 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01422 K19355 - gmx:100811461 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01422 3 21126751 21131729 Rops3g01422 3 21126751 21131729 ECH