Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01374 ATGAGGAAAAATGTTGGTTTTCATTCAGGAAGGATGTTTAGTGATAGGAAATGGATTATCCCATTTTTTGCAAGTTTGCTGGTATCTGTGAGTTTGGTTCTGACAGCTATTCTTGGGGTGTTTAGTTCTGCTGGTGGAGGAGATCAGTCACCATTGGACATTATTTCATTCAAGGGATCAGAGGGTTCCAGTGGATATTTTGTGGAATCAGATTCGGAAAGGTCTGTTAATGCTAGTGTGGTTATGAAAAAAGAGGTACCTAGGTTTGCATATCTTATTTCAGGCACCAAAGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTTTACCACCCAAGGAATCAATACATCTTGCATTTAGATCTTGAGGCGCCACCCCGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAATATTTCGTGAAGTAGAGAATGTGCGAGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCAACTATGATTGCTTGTACCCTTCAGGCTATTGCAATACTGTTGAAGGAGAGTTCAGAGTGGGACTGGTTTATAAACCTCAGTGCATCAGATTATCCTCTTGTGACACAGGATGATTTACTTCACGTTTTCTCTAATCTGTCTAGAGATCTCAATTTCATTGAACATACACGCATCGCTGGTTGGAAACTGAACCAAAGAGCAAGACCAATCATTATTGATCCCGCCCTTTACTTATCAAAGAAATCTGATTTAGCAGTGACTACTCAAAAAAGAACACTTCCCACATCTTTTACACTGTTTACTGGTTCAGCATGGGTTGTACTGACACGGTCCTATGTGGAGTACTGTATATGGGGATGGGATAACTTTCCACGGACTATGCTTATGTATTATACAAATTTTGTCTCCTCACCAGAGGGATATTTTCACACTGTCATTTGTAACAATCAGGAATTCCGGCATACAGCAATAAGCCATGATCTTCACTACATTGCTTGGGACAATCCCCCAAAGCAGCATCCCATCTCTTTAACAATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCTCCTTTTGCCAGAAAGTTTGCAAAGAATGATCCAGTGCTAGACAAGATTGACAAAGAACTTTTGGGGCGAACACATAGATTTTCACCTGGGGCATGGTGTATTGGGACCTCAGAGGGTGGAGCAGACCCTTGTTCTTTGCGTGGTAATGATACAGTGTTTAGGCCAGGCCCTGGTGCTGAGAGGCTACATGAGCTGCTTCAGGTGTTGTTATCTGAAGAATTCCTAAGCAAGCAGTGTTTGTGA 1302 0.4178 MRKNVGFHSGRMFSDRKWIIPFFASLLVSVSLVLTAILGVFSSAGGGDQSPLDIISFKGSEGSSGYFVESDSERSVNASVVMKKEVPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDLLHVFSNLSRDLNFIEHTRIAGWKLNQRARPIIIDPALYLSKKSDLAVTTQKRTLPTSFTLFTGSAWVVLTRSYVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNNQEFRHTAISHDLHYIAWDNPPKQHPISLTMKDFDKMVKSKAPFARKFAKNDPVLDKIDKELLGRTHRFSPGAWCIGTSEGGADPCSLRGNDTVFRPGPGAERLHELLQVLLSEEFLSKQCL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01374 433 PANTHER GLYCOSYLTRANSFERASE 15 432 IPR044610 GO:0015020
Rops3g01374 433 Pfam Core-2/I-Branching enzyme 89 348 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01374 Rops-Chr3 20226459 20231320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01374 76 432 Glycosyltransferase AT1G03520 77.591 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01374 - - gmx:100795146 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01374 3 20226459 20231320 Rops3g01374 3 20226459 20231320 ECH