Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01371 ATGAAGAGTGATTCAAATGACTTGGTATCTACAATTTCTCCGAAATATAGAAGCCATCAAGTGAGTTCACGGTTCATGTCTCCATCTTCAACTGGTCCACTTGAACCAAATTCAGCTTCTTCTATTGATTCACAGCGTGGTAAACTTTGGCCTAAGAGAAACATGGGCACTCTTGCTGATTACATAGGCAAGGACAGGCTCAGGGACAAGGAAGAACATGACCTTCATAATGGTCAGAATCAGAAACCTATGAAGACAACAGCAAAGTCCTCTGATTTCTCTGCTCTCAGGAAGCAGAGGAGTTGTAGGGAGTTTAATAATTCTGAGCACAACAACAACAGTAGTTTTCAAGGAAAATCTTCTTTTTCTCGTTCTTCATCAGTGAAGAAAATAGGTTCTAGTGAAGGAGATTTATCTTCGGGTGATTCAATGATGGTGAAGAAGCTCATGACACAGAAAGTGATTAAGAGGGCTAATTCCCTTACTGGGTACATGAGTTCAAAGTCTCAATGGGCATTGTCACCTGGGAGATCAGGGTCACCTCCTATGTCTGTGGGAAACAAGGAAAAGCCCTTGTACTTTTCAAGCTTGAGGCCTCAAAACAAGGGTCTTGAGAAGATTCTGAACATGGGTTTTGACCTCTTCAAGTCTAAGAAATCATCAACCACTAACTCTGAGGCTGTTCATCACCTTCGCTTGCTTCATAACAGGTTGCTTCAGTGGCGGTTTGCAAATGCTAAAGCTCAGGTTGTGAATGATAATATAATTCGTCAGGCAGAGAGCAATTTGATATATGCTTTGGATGGTATCACAAAGTTGCAATGTTCAGTCTTGCAAAAGAGGATACAGCTTGAGAGAGAAAGGCTTGAGATGAAGCTAAATTTTGTACTGCATTCTCAGATGAAGCTATTGGAAACCTGGGGAGATATGGAAAGACAACACCTAGCTGCAATTACCATAATGAAGGAGTGTTTGCATTCTGTTGTTAGTAAAGTTCCCCTTTTAGAAGGTGCAAAGGTTGACATTCAATTAGCATATATTGCTCAGAGGCATGCATCTGATCTCACAGATTCCATCAAGTCAATGTTATCTAGTTTTTCACCCTCGGCTGACAAGATTGCTGAATTGCTATCAGAATTGGCAAAAGTTGTTGCACAAGAGAAATTGCTCCTAGATGAATTCATTGATCTATTCCGGACCATATGTTTTCTTGAGCTTAAAGAAAGAAGCCTAATGTGCAGTCTCATTCAACTTGCATGTTGA 1263 0.4062 MKSDSNDLVSTISPKYRSHQVSSRFMSPSSTGPLEPNSASSIDSQRGKLWPKRNMGTLADYIGKDRLRDKEEHDLHNGQNQKPMKTTAKSSDFSALRKQRSCREFNNSEHNNNSSFQGKSSFSRSSSVKKIGSSEGDLSSGDSMMVKKLMTQKVIKRANSLTGYMSSKSQWALSPGRSGSPPMSVGNKEKPLYFSSLRPQNKGLEKILNMGFDLFKSKKSSTTNSEAVHHLRLLHNRLLQWRFANAKAQVVNDNIIRQAESNLIYALDGITKLQCSVLQKRIQLERERLEMKLNFVLHSQMKLLETWGDMERQHLAAITIMKECLHSVVSKVPLLEGAKVDIQLAYIAQRHASDLTDSIKSMLSSFSPSADKIAELLSELAKVVAQEKLLLDEFIDLFRTICFLELKERSLMCSLIQLAC* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01371 420 MobiDBLite consensus disorder prediction 1 47 - -
Rops3g01371 420 MobiDBLite consensus disorder prediction 106 140 - -
Rops3g01371 420 MobiDBLite consensus disorder prediction 73 141 - -
Rops3g01371 420 PANTHER AUGMIN FAMILY MEMBER 158 418 - -
Rops3g01371 420 Pfam QWRF family 98 392 IPR007573 -
Rops3g01371 420 MobiDBLite consensus disorder prediction 80 95 - -
Rops3g01371 420 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01371 Rops-Chr3 20206171 20208127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01371 - - aprc:113859691 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01371 3 20206171 20208127 Rops3g01371 3 20206171 20208127 ECH
Rops7g00953 7 12600590 12602868 Rops3g01371 3 20206171 20208127 PCT