Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01366 ATGGCGGTGGACAGTGAGAAAACGGGGTCTGGTGGAAAAGTTTGGAATTTTTGTAAAATGCCATTTTGGCAAACAACTCATGCTTCTTCATCTTCTTCTTCAAATTCTTCTATGCATGGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCAACTCATCAACCTTCAACCACTGTTTCTTCAATGGCCAAGTCTCTGCTCCCTACAAGGAGAAGGCTCAGTCTTGATCCTCCCAACAAGCTCTACTTTCCATATGAACCTGGTAAGCAAGTTAGAAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCCTTCAAGTTTCAAACCACTGCACCTAAGAGTTGTTATATGCGCCCTCCAGGTGGTATTCTTGCACCTGGTGAAAGTATAATTGCAACTGTATTTAAATTTGTGGAGCCACCGGAGAACAATGAGAAACCAACTGATCAAAAAAGCAGGGTGAAATTTAAAATCATGAGCTTAAAAGTGAAAGGTGAAATGGACTATGTACCTGAACTGTTTGATGAGCAAAGGGATCAAGTAGCAGTGGAGCAAATTTTGCGTGTGGTTTTTCTGGACCCTGAACACCCTTGCCCTGCTCTGGATAAGCTTAAGCGGCAGCTGGCAGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAATAGCTGGAGAAGGATTTGTTATAGATGAATGGAAAGAGAGAAGAGAAAGATACCTGGCCAAGCAGCAGGTTGAAGGGGTTGTTGATTCAATGTAA 795 0.4377 MAVDSEKTGSGGKVWNFCKMPFWQTTHASSSSSSNSSMHGVHQQSQILQSLDRSTHQPSTTVSSMAKSLLPTRRRLSLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPTDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDPEHPCPALDKLKRQLAEAEAALEARKKPPEETGPRIAGEGFVIDEWKERRERYLAKQQVEGVVDSM* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01366 264 Gene3D Immunoglobulins 71 201 IPR013783 -
Rops3g01366 264 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
Rops3g01366 264 MobiDBLite consensus disorder prediction 29 66 - -
Rops3g01366 264 SUPERFAMILY PapD-like 64 202 IPR008962 -
Rops3g01366 264 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Rops3g01366 264 FunFam vesicle-associated protein 4-1-like 71 200 - -
Rops3g01366 264 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 74 256 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01366 Rops-Chr3 20154143 20156885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01366 - - gmx:100820576 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01366 3 20154143 20156885 Rops3g01366 3 20154143 20156885 ECH
Rops7g00943 7 12506614 12509994 Rops3g01366 3 20154143 20156885 PCT