Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01360 ATGATCAAGTCAACTCATTCTCTCTCTCTCTCTCCACAGTGTTCTTCTTCACCAATCTCAATCGTTTACCTCATTTCATCTCCAGCAATGACTTCTGACTTCTTTAGCAACTTTAAGATTCCCGATTACATTCTTGTACCGGAGTCCGAGGTTAAGAATGTTGAAGATTGTTGTAACGTGCCTCAGTGTCCGGTGTTGGTTTTTGTTAACTCCAAGAGTGGTGGTCAACTAGGAGGGGACCTCTTACAAACATATCATACAGTTCTTAATGAAAAACAGGTGTTTGATCTGGGAGAACATGCTCCTGATAAGGTGCTGAGAAACATCTATTCTAATTTGGCAAGTCTCAAGCATCGGGGTGATCAGTTTGCTATAGGAATCATGGAGAGATTGAAATTAATAGTTGCAGGGGGAGATGGAACAGCAGGTTGGTTACTTGGAGTTGTTTGTGATCTCAGATTATCTCATCCACCGCCAGTAGCCACTGTTCCCTTGGGCACAGGGAATAATCTACCTTTTGCTTTTGGTTGGGGGAAGAAGAACCCGGGGACAGATCAACGCTCAGTTGAGGCATTCTTAGATCAAGTCATGAAAGCTAAGGAAATGAAGATAGACAACTGGCATATTCTCATGAGGATGAGAGCTCCAAAAGAAGGTCCCTGTGATCCAATTCCACCGCTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAAGCAGATGAACTTAATAGGGAAGGTTGCCACACTTTTCGTGGGGGGTTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATACTGAACGAAAGACGAATCCTGAAAAATTCAAAAACCAGTTGGTTAATCAGAGTACTTATGCTAAGCTTGGATGCAAACAAGGATGGTTTTTTGCTTCTCTAGTCCATCCTGCTTCCAGGAATATAGCACAACTTGCAAAAGTAAAAATCATGAGAAGACGTGGTCAATGGCAAGACCTTCACATACCACCCAGCATCCGGTCAATTGTATGCCTTAACTTGCCCAGCTTTTCTGGTGGATTCAATCCATGGGGTACACCAAACAGGAGGAAGCAGTGTGATAGAGATTTGACACCACCATATGTGGATGATGGCCTTCTAGAGGTTGTTGGTTTTAGAAATGCGTGGCATGGACTTGTTTTGCTTGCTCCAAAAGGACATGGAACTCGTCTTGCCCAGGCACATGGAGTCCGGTTTGAGTTTTGCAAAGGTGCAGCAGATCATACATTCATGAGGATCGATGGAGAACCTTGGAAGCAACCTCTTCCAGTTGATGATGATACTGTTGTGGTAGAGATTTCTCACCTTGGCCAGGTTAACATGCTTGCCACTCATAATTGCAAGTCTAAAAGCGTGTATGATCCATCATCACCACACCATGATGATGATGAGGAAGATGAAAGTGATGAAGACGAATCTGCAGCAGAGGAATATCGGAAGTTTGGTGCAGCAGATACATTTAGAATCCCAGATGATGTTGATATTTCTCATCTTAGTTAG 1542 0.4332 MIKSTHSLSLSPQCSSSPISIVYLISSPAMTSDFFSNFKIPDYILVPESEVKNVEDCCNVPQCPVLVFVNSKSGGQLGGDLLQTYHTVLNEKQVFDLGEHAPDKVLRNIYSNLASLKHRGDQFAIGIMERLKLIVAGGDGTAGWLLGVVCDLRLSHPPPVATVPLGTGNNLPFAFGWGKKNPGTDQRSVEAFLDQVMKAKEMKIDNWHILMRMRAPKEGPCDPIPPLELPHSLHAFHRVSEADELNREGCHTFRGGFWNYFSMGMDAQVSYAFHTERKTNPEKFKNQLVNQSTYAKLGCKQGWFFASLVHPASRNIAQLAKVKIMRRRGQWQDLHIPPSIRSIVCLNLPSFSGGFNPWGTPNRRKQCDRDLTPPYVDDGLLEVVGFRNAWHGLVLLAPKGHGTRLAQAHGVRFEFCKGAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVNMLATHNCKSKSVYDPSSPHHDDDEEDESDEDESAAEEYRKFGAADTFRIPDDVDISHLS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01360 513 Gene3D - 256 439 - -
Rops3g01360 513 FunFam diacylglycerol kinase 256 437 - -
Rops3g01360 513 PANTHER DIACYLGLYCEROL KINASE 50 461 IPR037607 GO:0004143|GO:0007165
Rops3g01360 513 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 60 213 IPR001206 GO:0016301
Rops3g01360 513 SMART dagk_c4a_7 64 207 IPR001206 GO:0016301
Rops3g01360 513 FunFam Diacylglycerol kinase 63 206 - -
Rops3g01360 513 PIRSF DAG_kinase_plant 3 462 IPR016961 GO:0004143
Rops3g01360 513 Gene3D - 63 210 IPR017438 -
Rops3g01360 513 SMART dagk_c4b_2 259 431 IPR000756 GO:0004143|GO:0007205
Rops3g01360 513 Pfam Diacylglycerol kinase catalytic domain 64 189 IPR001206 GO:0016301
Rops3g01360 513 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 63 438 IPR016064 -
Rops3g01360 513 MobiDBLite consensus disorder prediction 464 499 - -
Rops3g01360 513 Pfam Diacylglycerol kinase accessory domain 257 431 IPR000756 GO:0004143|GO:0007205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01360 Rops-Chr3 20066763 20073275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01360 32 506 Acyl Lipid Metabolism Gene Families AT2G20900 76.618 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01360 K00901 - gmx:100817198 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01360 3 20066763 20073275 Rops3g01360 3 20066763 20073275 ECH
Rops7g00929 7 12412229 12430031 Rops3g01360 3 20066763 20073275 PCT