Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01351 ATGGTCAACAATGAGCCTCCAACACATCTTGGGGGAAAATATGCTGCAATAGTGGTCTGTTGGCTTCTTGGCAATGGGTGTCTTTTCGCGTGGAACAGTATGCTTACTATAGAAGATTACTATGTTTACTTGTTTCCGAAATACCACCCGTCTAGGGTGCTTACTCTCGTATATCAGCCATTTGCATTTGCAACACTAGCAATACTGGCTTACAAAGAGGCAAAACTTAACACAAGAATGCGGAACCTTTTTGGATATACTCTCTTTTTCATAGGCACTTTGCTGGTGTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGAACTTTCATTGGTATATGTGCAATTAGTGCTGCATTTGGAATAGCAGATGCTCATGCCCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTTCTGCTGCATCAGGTGCCCTAACATCTGCTTTGAGGTTACTTACAAAAGCAGTATTTCAGAATTCTAAGGATGGTCTTCGCAAGGGTGCCATTATGTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTGTTCTCTATGCATTTGTCTTTCCAAAATTAACAATTGTGAAGTACTATCGTTCGAAAGCAGCATCCGAAGGATCCAAAACTGTTTCAAGTGACCTTGCCGCAGGTGGCATCCAAACCTCGGCTGGAGGAGCCACGGAAGATACAAAACAGTTGGAGCGCAAAGGAAATATCCAATTGTTATTGGAAAACATTGATTATGCACTTGATTTGTTTCTAATATATGTGCTAACACTGTCTATTTTCCCTGGATTCTTATCAGAAGATACTGGATCACACAGTTTAGGTACCTGGTATCCTCTTGTTTTAATTGCTATGTATAATGTGTGTGATCTGATCGGTAGATACATTCCCCTCTTGAAAATCCTGAAATTGGAGACTCGAAAATTGATCACAACAGCAACCATTTGTCGTTTTTTATTTGTGCCAGCATTTTATTTCACCGCAAAGTATGGCGGGCAGGGCTGGATGATAATGTTGACATCTTTCTTGGGATTATCCAATGGTTACCTCACTGTTTGTGTTCTCACTTCTGCACCTAAAGGTTACAAGGGACCGGAACAAAATGCCTTGGGAAACCTGTTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTAACACTTGACTGGTTGTGGTTAATAGGTAAAGGGTGGTAG 1245 0.4129 MVNNEPPTHLGGKYAAIVVCWLLGNGCLFAWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAFATLAILAYKEAKLNTRMRNLFGYTLFFIGTLLVLILDLATSGKGGLGTFIGICAISAAFGIADAHAQGGMVGDLSYMLPEFIQSFLAGSAASGALTSALRLLTKAVFQNSKDGLRKGAIMFFAISTFFELLCVVLYAFVFPKLTIVKYYRSKAASEGSKTVSSDLAAGGIQTSAGGATEDTKQLERKGNIQLLLENIDYALDLFLIYVLTLSIFPGFLSEDTGSHSLGTWYPLVLIAMYNVCDLIGRYIPLLKILKLETRKLITTATICRFLFVPAFYFTAKYGGQGWMIMLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01351 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 7 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g01351 414 Pfam Nucleoside transporter 123 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g01351 414 SUPERFAMILY MFS general substrate transporter 267 406 IPR036259 -
Rops3g01351 414 PIRSF ENT 5 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01351 Rops-Chr3 19921376 19924997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01351 3 412 Organic Solute Cotransporters AT4G05120 69.512 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01351 K15014 - gmx:100784933 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01351 3 19921376 19924997 Rops3g01351 3 19921376 19924997 ECH
Rops7g00914 7 12207151 12213908 Rops3g01351 3 19921376 19924997 PCT