Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01254 ATGGCAGGATCACTCTTTGTGCCATCATCTATAATGGAAGAAGAAGCCAGGTTTGAAGCTGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAGACTAACCCAAAGACCATACTCAGCTAGAGATGTGGTGTCCCTAAGAGGCAACCTCAGACAAACCTATGGCTCAAATGAGATGGCTAAAAAGCTATGGAAAACTCTCAAGACCCACCAAGCCAATGGCACTGCCTCAAGGACTTTTGGTGCACTTGACCCAGTTCAGGTCACCCAAATGGCTAAGCATTTGGATACCATTTATGTCTCTGGGTGGCAATGCTCAGCCACTCACACCACCACCAATGAACCTGGTCCAGACCTTGCTGATTACCCTTATGACACTGTCCCCAACAAGGTTGAGCATCTATTCTTTGCTCAGCAATACCATGACAGGAAACAAAGAGAGGAGAGGATGAGAATGAGCAGGGAAGAGAGGGCAAGAACCCCTTATGTTGATTACTTGAGACCAATCATAGCTGATGGTGACACTGGTTTTGGTGGCACCACAGCAACTGTTAAGCTTTGTAAGCTCTTTGTGGAACGTGGTGCAGCTGGTATCCACATTGAGGACCAATCTTCTGTGACAAAAAAATGTGGCCACATGGCAGGGAAAGTGCTAGTTGCAATCAATGAGCACATCAATAGGCTTGTGGCTGCAAGGTTGCAATTTGATGTCATGGGTGTGGAAACAGTTTTGGTAGCTAGAACAGATGCAGTTGCTGCTAATCTTATTCAATCCAACATTGACACAAGGGACCATCAATTTATCTTAGGTGTCACCAACCCAAGTCTCAAGGGAAAGAGCTTGGCAACTCTTATGGCACAAGGCATGGCTGCTGGCAAGAATGGAGCTGAACTTCAGGCTCTTGAGGACCAGTGGCTATCAATGGCACAGTTGAAGACTTTCTCAGAAGCAGTTGTGGATGCAATTAAGAACCTTAACATTGGAGAGGAAGAGAAAAGGAGGAAGTTGAATGAGTGGATGCAGTATTCAAGTTTTGAGAAATGTCTTTCCAATGAGGAAGGAAGAGAGATTGCTGAAAGATTAGGTGTAAGAAACCTCTTCTGGGACTGGGAATTGCCTAGAACAAGGGAAGGTTTTTACAGATTCAAAGGGTCTGTGACTGCAGCAGTTGTTCGTGGATGGGCTTTTGCTCCTCATGCTGATCTTATTTGGATGGAAACTGCAAGCCCCAATGTGGTTGAATGCACTCAGTTTGCTGAAGGGGTTGTATCAAAGCAGCCTCAGATGATGCTTGGATACAACCTTTCTCCATCTTTCAACTGGGATGCTTCTGGCATGACTGATGAACAAATGAGAGACTTCATTCCAAGAATTGCAAAGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGTCTACACTCTAATGCACTCATCACTTCAACTTTTGCAAGGGATTTTGCAAATAGGGGAATGCTGGCTTATGTTGAAAGGATTCAAAGAGAGGAAAGGAACAATGGGGTTGACACACTTGCTCACCAAAAATGGGCTGGTGCTAACTACTATGATAGGTACCTCAAAACTGTCCAAGGAGGTGTTGCATCAACTGCTGCAATGGGAAAAGGAGTGACTGAGGAGCAATTCAAAGAAACTTGGACTAGGACTGGAACTGTAGACATTGATAGAGGCACTATGGTGGTTGCTAAGGCCAGAATGTGA 1728 0.4537 MAGSLFVPSSIMEEEARFEAEVAEVQAWWNSERFRLTQRPYSARDVVSLRGNLRQTYGSNEMAKKLWKTLKTHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMRMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAINEHINRLVAARLQFDVMGVETVLVARTDAVAANLIQSNIDTRDHQFILGVTNPSLKGKSLATLMAQGMAAGKNGAELQALEDQWLSMAQLKTFSEAVVDAIKNLNIGEEEKRRKLNEWMQYSSFEKCLSNEEGREIAERLGVRNLFWDWELPRTREGFYRFKGSVTAAVVRGWAFAPHADLIWMETASPNVVECTQFAEGVVSKQPQMMLGYNLSPSFNWDASGMTDEQMRDFIPRIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKETWTRTGTVDIDRGTMVVAKARM* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01254 575 Gene3D - 17 535 IPR040442 -
Rops3g01254 575 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Rops3g01254 575 CDD ICL_PEPM 75 257 IPR039556 GO:0003824
Rops3g01254 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 11 535 IPR015813 GO:0003824
Rops3g01254 575 Gene3D - 262 377 - -
Rops3g01254 575 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
Rops3g01254 575 NCBIfam isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Rops3g01254 575 PIRSF ICL 368 554 IPR006254 GO:0004451|GO:0019752
Rops3g01254 575 PIRSF ICL 12 329 IPR006254 GO:0004451|GO:0019752
Rops3g01254 575 FunFam Isocitrate lyase 262 377 - -
Rops3g01254 575 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 557 IPR006254 GO:0004451|GO:0019752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01254 K01637 - gmx:100782793 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01254 3 18023588 18026352 Rops3g01254 3 18023588 18026352 ECH