Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01253 ATGATCATTGTTGCCACCGTTATCTTGACCTTATCTCTTACCATGTTCAAACCCAAGGACCCAGATATAAGTGTCCACCCTGTTGGCCTTGAGAACTTTGAGTTATTTTCACCCAATTCAACAAGTGTACCTCTAGGCATGGTGATCACAATAGTGAATCCAAATTATGGAAGCTTCAAGTGTGAAAATTCCACTGGTTTTCTTAAATATCATGACACCATTGTAGCTGAAGTTCCCATAGGGAAAAAATTTGTCCCTGCTCGAAGCATGACTAATGTGAGCACTTCTGCAGGTATTATGACTGGAAAATTGATATCAAATCCAAAATTTTGGACAGATATTGAAGATGGGGTCTTGAATTTCACATCAAAGGCCACACTAAATGGGAAAGTGCATATGCTCAAGGTTTTCAAGTTGAAGGCCAAGGTTGATATCTCATGTGACATCTCTCTTAACATAATTTCCATGGGTTCTGATTCCAGCTGCATATCCAAAATCAAGATGTGA 507 0.3905 MIIVATVILTLSLTMFKPKDPDISVHPVGLENFELFSPNSTSVPLGMVITIVNPNYGSFKCENSTGFLKYHDTIVAEVPIGKKFVPARSMTNVSTSAGIMTGKLISNPKFWTDIEDGVLNFTSKATLNGKVHMLKVFKLKAKVDISCDISLNIISMGSDSSCISKIKM* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01253 168 Pfam Late embryogenesis abundant protein 49 148 IPR004864 -
Rops3g01253 168 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 2 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01253 Rops-Chr3 18017093 18018004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01253 - - gmx:100306568 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00867 7 11639841 11640377 Rops3g01253 3 18017093 18018004 PCT