Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01252 ATGGATCATTCATCTAGAGGAAAAGCAGCACCTGCAAGTAATAGAAACACAAGTGATCCTGAAGAAGAAAGTGGATGGACAACTTACTTTGAAGATTTCTCAAAAGGCATAGAGCCCAGTTACTGTTCTAGTTTGGGTGGCTCCTCTTTGCTCTCAGATGCTGCTTCTTGTGCTGCATGGAAATTTTCTCATCAAAATCATGTTGTCTCTTCACCAAATTTGTCTAAGAAGCTATGTTTGAAGAAAGCAAGAACCAAACAGATATCTGAGGATGACCCTTTGGAGGACACTGCTAGCTCTCCTGTCAATAGCCCCAAGGTGAGAGACTTGAGTCCAAGTGGAATCATTTCAAGGAAGATTGATGATCAACTAGAAGGTTCTATGGGTAAGGAATTCACATCATCAGAGCATTATTCAGATTTGCAGAGGGATGATAATCATGAACTAAAATTTAATGGAAATAACATGGATTGCACAGACTTGAAGAAAAGGGGGCTCTGTCTGGTTCCTTTGTCCTTGTTGGCTAATTATTTGGGGTGA 540 0.4056 MDHSSRGKAAPASNRNTSDPEEESGWTTYFEDFSKGIEPSYCSSLGGSSLLSDAASCAAWKFSHQNHVVSSPNLSKKLCLKKARTKQISEDDPLEDTASSPVNSPKVRDLSPSGIISRKIDDQLEGSMGKEFTSSEHYSDLQRDDNHELKFNGNNMDCTDLKKRGLCLVPLSLLANYLG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01252 179 MobiDBLite consensus disorder prediction 86 112 - -
Rops3g01252 179 MobiDBLite consensus disorder prediction 1 27 - -
Rops3g01252 179 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 10 179 IPR039280 GO:0010089
Rops3g01252 179 MobiDBLite consensus disorder prediction 9 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01252 Rops-Chr3 17999577 18000594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01252 - - gmx:100786184 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01252 3 17999577 18000594 Rops3g01252 3 17999577 18000594 ECH
Rops7g00866 7 11623464 11624234 Rops3g01252 3 17999577 18000594 PCT