Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01238 ATGTCTTGGCTCCTCAGATCTAACAAGGCTTCCGCTTCTCTTTCTAGAACCTTCTCCTCCCTTCCTCGCTCTACCGATGCTCTCCGTCGGACCTCTCCTCCTCAGATCGGATCCCTCTCTCCCGTCGCCGAACTCTTCCACCGCAACACCGCCACGTCGCCTATCGCGGATGAAAACCCTTCCAAGGGAAACTTGACTGGTCTCCCCAAAGATCCGGCGAATAAACTTGGAAGTGTTTCTAATGATATCAATTCTTTGAGATACAAGGCTTTTGGACTGGATGCTAATGTGCTGGCTGGAGCTAGATATGGTATGGGAATTTGGGCTGCCAAGGGTCCGATGCTATTGGGAGTCAATGCTGGAATGGCTAGAAGTTTTGTGAAAGGTGTGGATGCAGACACATTGGGATTGACTGGTCAAAAACGTTTTATGAGTGACATCCCAAGTAAATCCAGTGAGACAAAGCCTTATGGTCTTCGCCCATTATCACCTCATCTTCCTGTTTATCAGCCCCAGCTTAATTCGACACTTTCAATTTTCAATAGAATTGCCGGAGCATCACTAGCCGCTGTCATTGTGCTTTTCTATATGATATATATGAAAATTGTACGTTTGATCCTGAGGTGGAACTTGCTTGCTTCGACCATGGAGGCATTCTTCCATGTCATAAGGAATTTCATTAAGCAATGTGAATTTGCTTTTCTGTAG 708 0.4605 MSWLLRSNKASASLSRTFSSLPRSTDALRRTSPPQIGSLSPVAELFHRNTATSPIADENPSKGNLTGLPKDPANKLGSVSNDINSLRYKAFGLDANVLAGARYGMGIWAAKGPMLLGVNAGMARSFVKGVDADTLGLTGQKRFMSDIPSKSSETKPYGLRPLSPHLPVYQPQLNSTLSIFNRIAGASLAAVIVLFYMIYMKIVRLILRWNLLASTMEAFFHVIRNFIKQCEFAFL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01238 235 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 154 220 IPR034804 GO:0016020
Rops3g01238 235 MobiDBLite consensus disorder prediction 52 73 - -
Rops3g01238 235 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 148 235 IPR034804 GO:0016020
Rops3g01238 235 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 131 215 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Rops3g01238 235 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 160 205 IPR000701 GO:0016627
Rops3g01238 235 SUPERFAMILY LeuD/IlvD-like 86 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01238 Rops-Chr3 17569560 17573370 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01238 K01681 K00236 gmx:100527396 264.618