Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01224 ATGGGTTACTCCATGAGACTGTGTTCTGTGTTGGTGGTGTTGTTGGTGGCATGTGCAAGTGGTGAGGACCCTTATAGGTTCTACACTTGGAATGTCACTTATGGAGACATTTATCCACTAGGAGTTAAACAACAGGGGATATTGATAAATGGGCAATTCCCAGGGCCACAGATCGAGTCTGTTACCAATGATAACTTGATTATCAATGTTTTCAACAGCTTGGATGAACCTTTCCTCATCTCTTGGAATGGAGTGCTGCAGCGGAGAAACTCATGGCAGGATGGAGTATATGGTACCAATTGTCCAATCCAACCAGGGCAGAACTTCACTTATGCTCTTCAAGTAAAGGATCAGATTGGTAGCTACTTCTACTTTCCTTCTCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGTTTCAAAATTGCTAGCCGCTCTGTGATTCCTGTACCTTTTGACCCTCCAGCTGGAGATTTCACCATATTGGCAGGAGATTGGTACAAGAGAAATCACACAGATTTGAAGGCAATTTTAGATAGTGGAAGTGACCTTCCTTTCCCTGATGGGCTTATCATTAATGGTCATGGTTCCAATGCCAACACATTCACAGTTGATCAAGGCAAGACTTACAGATTTCGGATATCAAATGTGGGGCTTACCACTTCCATCAATTTCAGAATCCAAGGGCATAAGATGATGCTTGTTGAGGTGGAAGGAACACACTCTCTCCAAAACACTTATGACTCACTTGACATTCATTTGGGACAGACTTACTCCGTGTTGGTTACTGCTGATCAACCACCACAAGACTACTACATTGTTGTCACAACAAGATTCACCTCCCAAGTGTTGAATGCTACATCCATTCTTCATTATAGTAACTCAGCAGGAAGTGTTTCTGGTCCTCTCCCTGAAGGGCCAACAATTCAGATTGATTGGTCTATTGAACAAGCTCGCTCTCTTAGAAGGAATCTGACAGCAAGTGGGCCAAGACCTAATCCACAAGGATCTTACCATTATGGTTTGATAAACACAACTCGTACAATTAGGCTTCAAAATTCTGCTCCAGTTATCAATGGAAAACAAAGATATGCTGTCAATAGTGTGTCCTTTATTCCTGCTGATACACCACTTAAACTCACTGATTACTTCAAGATCCAAGGGGTGTTTTCCCTTGGAAGCATCCCTGAGAACCCAACTGGTGGAGGTGGTTACCTTCAGACTTCTGTCATGGCTGCTGATTTCCGAGGCTTTGTTGAGGTTGTGTTTGAGAATCCTGAAGACACTGTACAATCATGGCACATTGATGGCCACAGCTTCTTTGTAGTAGGAATGGATGGAGGACAATGGTCAGCTGCAAGCAGGCTAAACTACAATTTAAGAGATACAATTTCTCGTTGCACAGTTCAGGTTTATCCCAAGTCATGGACTGCACTTTACATGCCTTTGGACAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCTCATCAGTACCTAGGCCAGCAATTTTATCTTAGAGTGTATTCACCTGCAGAATCATGGAGAGATGAGTATCCAATTCCAAGTAATGCTTTGCTATGTGGCAAGGCAATAGGCCACCAACATTAG 1614 0.4331 MGYSMRLCSVLVVLLVACASGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPIQPGQNFTYALQVKDQIGSYFYFPSLAFHKAAGGYGGFKIASRSVIPVPFDPPAGDFTILAGDWYKRNHTDLKAILDSGSDLPFPDGLIINGHGSNANTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMMLVEVEGTHSLQNTYDSLDIHLGQTYSVLVTADQPPQDYYIVVTTRFTSQVLNATSILHYSNSAGSVSGPLPEGPTIQIDWSIEQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLTDYFKIQGVFSLGSIPENPTGGGGYLQTSVMAADFRGFVEVVFENPEDTVQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTISRCTVQVYPKSWTALYMPLDNVGMWNVRSENWAHQYLGQQFYLRVYSPAESWRDEYPIPSNALLCGKAIGHQH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01224 537 SUPERFAMILY Cupredoxins 154 332 IPR008972 -
Rops3g01224 537 Pfam Multicopper oxidase 32 145 IPR011707 GO:0005507
Rops3g01224 537 SUPERFAMILY Cupredoxins 342 531 IPR008972 -
Rops3g01224 537 FunFam Monocopper oxidase-like protein 342 537 - -
Rops3g01224 537 Pfam Multicopper oxidase 158 294 IPR001117 -
Rops3g01224 537 Pfam Multicopper oxidase 376 510 IPR011706 GO:0005507|GO:0016491
Rops3g01224 537 FunFam Monocopper oxidase-like protein 156 330 - -
Rops3g01224 537 Gene3D - 25 146 IPR008972 -
Rops3g01224 537 Gene3D - 156 330 IPR008972 -
Rops3g01224 537 PANTHER MULTI-COPPER OXIDASE 43 505 IPR045087 -
Rops3g01224 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Rops3g01224 537 Gene3D - 341 534 IPR008972 -
Rops3g01224 537 CDD CuRO_3_AAO_like_1 373 495 IPR034275 GO:0005507
Rops3g01224 537 CDD CuRO_1_AAO_like_1 27 143 IPR034273 GO:0005507
Rops3g01224 537 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01224 Rops-Chr3 17382412 17386524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01224 - - gmx:100791301 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01224 3 17382412 17386524 Rops3g01224 3 17382412 17386524 ECH