Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01216 ATGTTGAGTGTTCTAAGATCATCTGCTCCCAGATTCTTCTCCACAGTCCCTCTTCGAACCATTTCACCCTTTGCTTCTCGCTTCTCAGTTCGTTCCTTTGCTGACTCTGCTCCTTTCAACAAAATCCAGATTCAAAGGGATGACACTACATTTGATGCATATGTTGTTGGCAAACAAGACGCTCCTGGAATTGTTGTGCTTCAGGAGTGGTGGGGTGTGGATTTCGAAATTAAAAATCATGCAGTGATGATTTCTCAACTTGGTCATGGATTTAAAGCTCTTATCCCAGATCTTTACAGAGGAAAGGTTGGTCTGGATGTTGCAGAAGCACAACATTTGTTTGATGGTCTTGATTGGCAAGGTGCTGTGAAGGATATCCGTGCTTCAGTTAACTGGCTGAAAGCAAATGGTTCAAAGAAGGCTGGTGTAACTGGATTTTGTATGGGAGGTGCTCTTGCTATTGCTAGCTCTGTCTTGGTTCCAAATGTTGATGCTGTTGTAGCTTTCTATGGAGTTCCTCCTCCTGAGCTTGCAGCCCCTGCCCAAGCTAAGGCTCCTGTTCAGGCTCACTTTGGAGAGCTGGACGATTTTGTTGGCTTTTCAGATGTTACGGCTGCCAAGACCTTGGAGGAGAAATTGAAGGCATCTGGAGTTCCACATGAGGTACACATATATCCTGGCAACAGACATGCATTCATGAACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAGCATGGGAATGCCTGATGAAGATGAAGCTGCAGTTCAGCTGGCCTGGTCTCGCTTCCAGTCATGGATGACACATCACTTGTCTAGCTAG 822 0.4586 MLSVLRSSAPRFFSTVPLRTISPFASRFSVRSFADSAPFNKIQIQRDDTTFDAYVVGKQDAPGIVVLQEWWGVDFEIKNHAVMISQLGHGFKALIPDLYRGKVGLDVAEAQHLFDGLDWQGAVKDIRASVNWLKANGSKKAGVTGFCMGGALAIASSVLVPNVDAVVAFYGVPPPELAAPAQAKAPVQAHFGELDDFVGFSDVTAAKTLEEKLKASGVPHEVHIYPGNRHAFMNRSPEGIKRRKSMGMPDEDEAAVQLAWSRFQSWMTHHLSS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01216 273 Gene3D alpha/beta hydrolase 35 271 IPR029058 -
Rops3g01216 273 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 42 271 - -
Rops3g01216 273 Pfam Dienelactone hydrolase family 51 270 IPR002925 GO:0016787
Rops3g01216 273 SUPERFAMILY alpha/beta-Hydrolases 41 271 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01216 Rops-Chr3 17231812 17236486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01216 K01061 - gmx:100799250 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01216 3 17231812 17236486 Rops3g01216 3 17231812 17236486 ECH
Rops7g00841 7 11231555 11234676 Rops3g01216 3 17231812 17236486 PCT