Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01211 ATGGCTGAAACCCTAAGCCCTAATCCCACGATGGGTCAGAAGCAGAGGCTTCCCATTACCGCACGCATTCAATCCCCAACCAGCCCTTTCTTCTTGGGTTCCAACGATGACCAACTCGAACGCGCCCAGGCACGCGCTGCACGCGCCGCCGCCATCCGCCGCAAGAGCCTCGCCATTTCTCAATCGCTACGTCCCACTTCCGATCCATGTCTCAACAAGCAACAAATCCTCGATTTGTTCCAAAATTGCATAAAGCTCGCCAGCGAAAATAAAATTAATCAGAAGAACACGTGGGAGTTGAACTTGATTGACCACCTTACTGATATAATTAAGGCTGAAGAAGAAGATGATGCAGAGACTAATTTTCAAAAGGCAAGTTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAATAGAGCAGGCCAAGAAGATGAACAAGACACTACTATGGAGGGTGTTAACATTGAAAGTGGACAAGAAGGAAACAGGAAAGAGACGGACAAAAAGTTGTCACCTTTGTCGACACTGGAATCATCTTTTGAGGTTCTCAATGTAAAGAAGTTCGATGCTGCATTTGTGGTGGATCCCCTCTATCGCCAGACAACAGCAAAATTTGACGAAGGTGGCGCCAAGGGTCTTTTAATGAATAATCTCGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCTGCAAAGTGTATGGAAAGCCAAAATCAACATGATATTTCGGATACTATTGATCTTTCTTTTGCCAGAGATTGTATTGAGCAGATGGTATTGAACATGCGTGTGAAGGATGAAATTTCTCCAACTCTCAGGACTATAGTAAACCAATTCGATGAAAATAATAGAAGGCCTACCGATTTTCAACTTCATGGCCAGAATTCAGCTGAAGAGCTTGAAGCTGATTTTAATTTTGAAAATGGAGCTGACAGAGAAGAATATGAGAACGGCATGACCTGGAGTGATGATCATGATGACCACACAGTTGTTGCTGATCTAGGCTCTAATGATGTAGATCCAAGTTTTCCTGGTTATCCTCAGGAAAATGAGCCATTTGCTTCCCCAGACCCTGATGTCGATGACAGATTTGAAAATGTTGATGAGTACTTGTTCTTGAGTCTTGGTTTTAGTTCAAAACAAAATGCATGGGCAGGTCCTGATCATTGGAAGTATCGAAAATCCAAAGTCTCTGATGTTCAACCTACATCTGAAGATGGATCAACCCTAAAAACTAAGCAGCCAAGGAGCAAGAGACAAGCTGAAGTTGATTTAGATTTCACAAATTCTCTGGAGAAAAACACTTTAGATATATTTTCTCCTCCCAAGAATCCCAAATCGTTACTGCTCCCTGAAAGCAGACTGCCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAGAATCTTGTCAAGTTATTTCTTCTGCCGAATGTGAAGTGTCTTGGGAGGAGGGCAAAACGGTTCTCAGATGGATCTAGAGAACAATGCAATGAGTATGAATCATTCCCATCCTGGGATAATGGAAGTGTTTGTGGTGGTGAATCTGGTGACTATGAAGGTGATCATCATAGTGACATCGAGGACCCTGGCATTCTTATTACCCAGCCTCGTCAGGTCAATAAAATTGAAGTACAGTATGACAAAACGTCAAAACAGGTTGATGTCCAGGCCCTAAAAATTACTCTCTGGGACAATGTTCAAGAGTCGGTTAAACTTCCTTTCCAGGGTCAAAAAGAAATGGTATCTTTCAGGAATCTATTGGCCAACTTTCCTAGCGAATGCAATGCCGCTGCAAACATCAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTATTGCATTTGGCAAATGAGAAAGGCTTGAGCATTCAAAGTTGCCCCAACTTGGATGATCTTTCAATATACCTTCCACATGTTGGTGATGCTATAAGTGAATCAGTTTAG 2016 0.4276 MAETLSPNPTMGQKQRLPITARIQSPTSPFFLGSNDDQLERAQARAARAAAIRRKSLAISQSLRPTSDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEDEQDTTMEGVNIESGQEGNRKETDKKLSPLSTLESSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSLEVPAKCMESQNQHDISDTIDLSFARDCIEQMVLNMRVKDEISPTLRTIVNQFDENNRRPTDFQLHGQNSAEELEADFNFENGADREEYENGMTWSDDHDDHTVVADLGSNDVDPSFPGYPQENEPFASPDPDVDDRFENVDEYLFLSLGFSSKQNAWAGPDHWKYRKSKVSDVQPTSEDGSTLKTKQPRSKRQAEVDLDFTNSLEKNTLDIFSPPKNPKSLLLPESRLPCNTKLPEDCHYQPENLVKLFLLPNVKCLGRRAKRFSDGSREQCNEYESFPSWDNGSVCGGESGDYEGDHHSDIEDPGILITQPRQVNKIEVQYDKTSKQVDVQALKITLWDNVQESVKLPFQGQKEMVSFRNLLANFPSECNAAANISDISPHLCFICLLHLANEKGLSIQSCPNLDDLSIYLPHVGDAISESV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01211 671 MobiDBLite consensus disorder prediction 416 442 - -
Rops3g01211 671 PIRSF Condensin_H 271 552 IPR022816 GO:0000796|GO:0007076
Rops3g01211 671 PIRSF Condensin_H 4 275 IPR022816 GO:0000796|GO:0007076
Rops3g01211 671 PIRSF Condensin_H 536 661 IPR022816 GO:0000796|GO:0007076
Rops3g01211 671 MobiDBLite consensus disorder prediction 154 187 - -
Rops3g01211 671 Pfam Condensin complex subunit 2 28 513 IPR022816 GO:0000796|GO:0007076
Rops3g01211 671 Pfam Condensin complex subunit 2 555 658 IPR022816 GO:0000796|GO:0007076
Rops3g01211 671 PANTHER CONDENSIN COMPLEX SUBUNIT 2 20 660 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01211 Rops-Chr3 17158095 17163485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01211 K06676 - gmx:100793772 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01211 3 17158095 17163485 Rops3g01211 3 17158095 17163485 ECH
Rops7g00456 7 5707113 5711629 Rops3g01211 3 17158095 17163485 PCT