Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01199 ATGACTCTGGCTCGTTCCTTTGCAATTGTGTTCCTCCTCTTTGCTCTGTACTGTGGTTTGGACCCATTTCAACACAGCCCCATAGCTACCTTCCCTGATTTTGAGGTTAAAAAGGTTGACCTGCCCCCATGGTCTGAGGTTCCTGTTGACCAAGACAAGCAGAACTTGTTGCAAAAATCGGAGATTAAGTTTCTGAATCATGTTCAGGGACCAGAGAGCATTGTCTTTGACCCTCTTGGTCGTGGCCCTTACACTGGTCTCGCTGATGGGAGAATCTTGTTCTGGAATGGACAATCTTGGGTTGATTTTGCTTATACCTCTCCCAACAGGTCAGAACTATGTAATCCTATAGCATCTGCGACACCGTTTAGCTATGTGAAGACTGAACATATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACTGGTGATTTATACATTGCAGATGCATATTTTGGGCTGATGAAGGTGGGGCCCGAGGGTGGTTTAGCAACATCTCTTGTAACTGAGGTTGAAGGGGTGCCACTGAGATTTACCAATGATGTTGATGTTGATACAGAAGGGAATGTTTATTTTACAGAAAGCAGCTCTAATTATCCGAGGAGGAATTTCATTCAGCTGGTATTTTCTGGGGATGATTCTGGCAAGGTTTTGAAATACAACCCTGCCACTAAGGAAACCATTGTTCTTATGAGGAACATTCAATTCCCAAATGGCATTTCCTTAAGCAAGGATGGTTCCTTCTTTGTCTTTTGTGAAGGGGCTATTGGCAGGTTACGTAAATACTGGTTAAAAGGAGAAAAAGCTGGGACTTCAGAGATCTTGGCCATCCTATCTGGATTTCCTGACAATGTGAGAGTCAATGAAAATGGTGATTTTTGGGTGGCTCTTCATTGTCGGAGGTCTATGTTCTCATACCTCAATGGTCTCTATCCAAATATGAGGAAAGTTATACTCAAGCTTCCTATACCAACAAAGTATCAATACCTGCTTCAAATTGGAGGCCGGCTACAAGCAATAATTGTGAAGTATAGCCCTGAAGGTAAACTTTTGCAGATATTGGAGGACAGTGAGGGAAAAGTTGTTAAAGCAGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTCTGGATGGGAAGTGTTCTCATGCCTTTTATTGCAGTTTACAACTTGCCATGA 1182 0.4298 MTLARSFAIVFLLFALYCGLDPFQHSPIATFPDFEVKKVDLPPWSEVPVDQDKQNLLQKSEIKFLNHVQGPESIVFDPLGRGPYTGLADGRILFWNGQSWVDFAYTSPNRSELCNPIASATPFSYVKTEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLVTEVEGVPLRFTNDVDVDTEGNVYFTESSSNYPRRNFIQLVFSGDDSGKVLKYNPATKETIVLMRNIQFPNGISLSKDGSFFVFCEGAIGRLRKYWLKGEKAGTSEILAILSGFPDNVRVNENGDFWVALHCRRSMFSYLNGLYPNMRKVILKLPIPTKYQYLLQIGGRLQAIIVKYSPEGKLLQILEDSEGKVVKAVSEVEEKDGKLWMGSVLMPFIAVYNLP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01199 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 385 - -
Rops3g01199 393 Pfam Strictosidine synthase 182 269 IPR018119 GO:0009058|GO:0016844
Rops3g01199 393 Pfam Strictosidine synthase-like, N-terminal 65 94 - -
Rops3g01199 393 Gene3D - 54 392 IPR011042 -
Rops3g01199 393 FunFam Putative strictosidine synthase 54 393 - -
Rops3g01199 393 SUPERFAMILY Calcium-dependent phosphotriesterase 42 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01199 Rops-Chr3 16950439 16954228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01199 - - gmx:100803331 686.797