Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops3g01195 | ATGGAGTTTCATTCTCTTCCTAAGCTCTACCTCCTTCTCTCCTTTTCCATCCTCTTCCTTTCATCTTTTCACGTTCAAGCTAAAGTTAGCTTCAAATACTGCGATAAGAAGGCAGACTATGCTGTGAAGGTGTCTGGAATTGAAATATCACCAAACCCTGTGGTGAGTGGCAACCCGGCTACCTTTAAGATCTCAGCTACTTCTGGTCAGGCTATTTATGGTGGAAAGGTGGTAATTGGAGTTTCATATGTCGGGGTGCCTGTCCATACTGAAACCATTGATCTTTGTGAGGAAGTACACTGCCCTGTTGCTAACGGCAATTTTCTGATTTCTCACACCCAAACATTGCCTTCAATTACTCCACCGGGACCCTATGCTCTGAAGATGACACTGAAGGATGAGGAGGGAGAGCTGTTAACTTGCATCAAGTTTAACTTTAAAATCGTTCTGGGATCTTTTGTGTCTGATATGTGA | 474 | 0.4346 | MEFHSLPKLYLLLSFSILFLSSFHVQAKVSFKYCDKKADYAVKVSGIEISPNPVVSGNPATFKISATSGQAIYGGKVVIGVSYVGVPVHTETIDLCEEVHCPVANGNFLISHTQTLPSITPPGPYALKMTLKDEEGELLTCIKFNFKIVLGSFVSDM* | 158 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops3g01195 | 157 | FunFam | putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 | 29 | 150 | - | - | |
| Rops3g01195 | 157 | Gene3D | - | 27 | 150 | - | - | |
| Rops3g01195 | 157 | CDD | PG-PI_TP | 31 | 146 | IPR033917 | GO:0032366 | |
| Rops3g01195 | 157 | Pfam | ML domain | 29 | 148 | IPR003172 | - | |
| Rops3g01195 | 157 | SMART | pgtp_13 | 31 | 146 | IPR003172 | - | |
| Rops3g01195 | 157 | SUPERFAMILY | E set domains | 28 | 149 | IPR014756 | - | |
| Rops3g01195 | 157 | PANTHER | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED | 9 | 149 | IPR039670 | GO:0015918|GO:0032934 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops3g01195 | - | - | gmx:100500637 | 243.432 |