LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g01191	ATGGGAAAGAACGAGAAAACAGGGCTAGGAAGAGCCCTGGTGAAGCAGCACAACCAGATGATTCAACAGAGCAAGGAGAAGAATCGTTTCTACAAGAAGAAGTTTCTAGAATCCTTCACCGAAGTCTCCGACATCGACGCCATCATCGAACGACAAACCGAAGAAGAGCCACACCTCGATCTCCACCCTGCCCCACCCACTCTCCTCATCAATCTGGATTCAGGTTCTGCCTCAAACGACACAACACTGGAAGAAACGAAGAAGCAGCAGAAGATAGAGGAAGCATTACACGCTAGCAGTCTTCGAGTTCCACGAAGGCCACCATGGAATGCTGAAATGTCTATTGAAGAGCTTCATGCAAATGAAACACTAGCTTTCTTGAGCTGGCGTCGAAGCATAGCGAGGCTAGAGGAAAATAAGAGGCTCGTTCTTACCCCGTTTGAGAAAAATCTTGACATTTGGAGACAGCTCTGGCGGGTTGTTGAGCGTAGTGATTTGCTTGTTATGGTTGTTGATTCAAGGGATCCACTGTTCTATCGCTGTCCTGACCTTGAGGCATATGCAAGAGAGGTTGATGAGCATAAACGAACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGCATCTATCAGAGAGAAATGGGCCGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCTGCTAAAGCTGCTACTGCAGCTCTGGAAGGCAAAAAGCTTGGTCCATCATGGGAGGCTGATAACTTGGGGAGAACTAATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTTTGGCCCGCTTGCAATCAGAGGCTGAAGAGATAGTAAACAGGAGGAGAAATTCAGGCTCCTCTGATACAGGGCCATCTACCATTAAATCCTCTGATGAAAATGCTACTGATAGTTCATCTTCTAGTAATGTAATTGTGGGATTCGTTGGATATCCAAATGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGGACTGGTGTCACCTCTACCCCGGGGAAAACAAAGCACTTTCAGACATTAATTATTTCTGACAAACTGACCCTTTGTGACTGTCCTGGATTAGTGTTTCCATCTTTCACAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTGCCTATTGATAGGATGACTGAACATAGGGAATCTATCCAAGTTGTAGCTGATAAAGTCCCAAGACATGTCATTGAGGAGATTTATAAGATAAGTCTTCCTAAACCTAAGCCATATGAGCCCCAGTCCCGCCCCCCTCTGGCATCGGAACTTTTGAGAGCATATTGTGCTTCTCGTGGGTATGTTGCCTCCAGTGGACTGCCTGATGAAACTAGGGCTGCTCGTCAGATACTGAAAGATTACATTGATGGGAAGCTGCCTCATTATGAAATGCCTCCTGGTGAGTCAAATGAGGAACTAGCTTTGGAAGATCCCACTGGACATGACTCAGTTAACTTGCATGAGTCAGATTCATCTGGTATTGAAGATTCTTCGGATGTTGAGAGTGAACTTGCACCAAATCTTGAACATGTATTGGATGACCTCAAGTCGTTTGACATCGCTAATGGACTTGCATCAAAGAAAGTTACTGTTAAGAAGTCAAAGGCATCTCATAAGCACCATAAAAAGCCCCAGAGGAAAAAAGATCGTTCTTGGAGAGCAGGGAATGATGATGATGATGGGATGCCGGTTGCTAGATTCTTTCAGAAACCAGCAAATAGTGGTTCTTTGAAGGCATCGAGGAAATAG	1779	0.4446	MGKNEKTGLGRALVKQHNQMIQQSKEKNRFYKKKFLESFTEVSDIDAIIERQTEEEPHLDLHPAPPTLLINLDSGSASNDTTLEETKKQQKIEEALHASSLRVPRRPPWNAEMSIEELHANETLAFLSWRRSIARLEENKRLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGPSWEADNLGRTNNPDTKIYGRDELLARLQSEAEEIVNRRRNSGSSDTGPSTIKSSDENATDSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFTSSRYEMIACGVLPIDRMTEHRESIQVVADKVPRHVIEEIYKISLPKPKPYEPQSRPPLASELLRAYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMPPGESNEELALEDPTGHDSVNLHESDSSGIEDSSDVESELAPNLEHVLDDLKSFDIANGLASKKVTVKKSKASHKHHKKPQRKKDRSWRAGNDDDDGMPVARFFQKPANSGSLKASRK*	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g01191	592	PRINTS	GTP1/OBG GTP-binding protein family signature	360	375	IPR006073	GO:0005525
	Rops3g01191	592	PRINTS	GTP1/OBG GTP-binding protein family signature	314	334	IPR006073	GO:0005525
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	560	574	-	-
	Rops3g01191	592	FunFam	Large subunit GTPase 1	374	475	-	-
	Rops3g01191	592	Pfam	50S ribosome-binding GTPase	314	370	IPR006073	GO:0005525
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	469	513	-	-
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	539	592	-	-
	Rops3g01191	592	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	152	444	IPR027417	-
	Rops3g01191	592	ProSiteProfiles	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile.	154	369	IPR030378	GO:0005525
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	285	309	-	-
	Rops3g01191	592	PANTHER	LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED	1	563	IPR043358	GO:0003924
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	484	504	-	-
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	541	559	-	-
	Rops3g01191	592	CDD	HSR1_MMR1	153	369	-	-
	Rops3g01191	592	MobiDBLite	consensus disorder prediction	280	309	-	-
	Rops3g01191	592	Gene3D	-	373	475	IPR023179	-
	Rops3g01191	592	Coils	Coil	14	34	-	-
	Rops3g01191	592	Gene3D	-	153	370	IPR027417	-
	Rops3g01191	592	FunFam	Large subunit GTPase 1	153	370	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops3g01191	Rops-Chr3	16841249	16845698	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g01191	K14539		-	gmx:100817523	951.814

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops3g01191	3	16841249	16845698	Rops3g01191	3	16841249	16845698	ECH