Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01180 ATGGAGAAAGAGGAACAAGGAATCGAAAATTGGAGCGAACGTGTGGAAGACCTTGTAGACTCAGGGGATGTGGAAAGCGCTATCACACTTCTTGAATCGGTGGTTGAAACCCTAAACCCTTCTTCTTCTTCCGATGAGGTTTCTCAGCTTCAATTATCCTCTGCGCTTTCTGATTTGGCAAATCTTTATTCCTCCAAAGGCTTCTCTATCAAAGCACACGACCTTCAATCTCGCGCTTCACTCATCAAACAACAACTTCACCATCATTCTCATTCCACTGGCGCACGTGTTGAGAAAGAATCCAAGGAGGACGGTTTTCTTATTAGAACACCAACCAATGTTGCTTCTTCGTCTTCGAAAGATTCTGTTTCTGATGGAGATTCCTCGAATCTTGGAAATTTTGGAAAGCATACAGAATTGCCTGGTCACGCTTCCACCGGCAACGCTTCTGATAACGATGATTGGGAAGCAATAGCTGATCGTGAACCTGATGAGTTACTGTCCACAGTATCCTCAGACTGTTTATCTGAAGTATCAAATCTTAAATTGGAGAACACCAAAAGTCAAACCCCAAAGCGGCGTGGAAGAGGAACATTCTCTTATGAAAAACAAAAACTTTATAGTGATCAGTTACATGATAGCTCAGTCATTGAAGCTGAGGATGAAGAAATTCCTTCTAGTTCAGAAGATAGAAAAGATATAGAAAACTTAAAATATGGGACCAGTCATGTTCTTGTGTTGGCTGACTTTTCACCAAGTACTAGGACAACAGACCTGGAGAAGCTTTTTGAGGACTTCAAAGATGGTGGATTTGTGATTCGCTGGGTCAATGATACAGTTGCACTTGCAGTATTCCGAACACCTTCAGTTGCTCTGGAGGCTCGAAACAGTATTCATTGTTCATTCACTGTGAGAATACTTGATGAAGATGATCCACTTCTTAGTTCAATTAAAGCAAGAGACCTGGAACCACCTCGGCAAAGGCCGAAAACCTCAGCCCAAGCAGCGCAGAGGCTGATTGCTCATGGAATGGGGTTAAAATTGTCATCCATGAGTGTTGGGTCCCGAGAACATAAAAAGCAAGAAGATACTAGGAGGGAACGTATTGTTACCAGGCAAAAATTGAGAGACGAGGCTTGGGGAGATGATTAA 1152 0.4271 MEKEEQGIENWSERVEDLVDSGDVESAITLLESVVETLNPSSSSDEVSQLQLSSALSDLANLYSSKGFSIKAHDLQSRASLIKQQLHHHSHSTGARVEKESKEDGFLIRTPTNVASSSSKDSVSDGDSSNLGNFGKHTELPGHASTGNASDNDDWEAIADREPDELLSTVSSDCLSEVSNLKLENTKSQTPKRRGRGTFSYEKQKLYSDQLHDSSVIEAEDEEIPSSSEDRKDIENLKYGTSHVLVLADFSPSTRTTDLEKLFEDFKDGGFVIRWVNDTVALAVFRTPSVALEARNSIHCSFTVRILDEDDPLLSSIKARDLEPPRQRPKTSAQAAQRLIAHGMGLKLSSMSVGSREHKKQEDTRRERIVTRQKLRDEAWGDD* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01180 383 MobiDBLite consensus disorder prediction 347 383 - -
Rops3g01180 383 Gene3D - 240 308 IPR012677 -
Rops3g01180 383 MobiDBLite consensus disorder prediction 91 106 - -
Rops3g01180 383 MobiDBLite consensus disorder prediction 353 383 - -
Rops3g01180 383 Coils Coil 1 21 - -
Rops3g01180 383 MobiDBLite consensus disorder prediction 84 154 - -
Rops3g01180 383 SUPERFAMILY RNA-binding domain, RBD 240 299 IPR035979 GO:0003676
Rops3g01180 383 PANTHER GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 3 381 IPR039884 -
Rops3g01180 383 MobiDBLite consensus disorder prediction 110 135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01180 - - gmx:100817151 507.679