Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01173 ATGGAAAAGCAAGATGGACACAGAGTGGTGATCTTAGGAGGCGGTGTTGCAGGTGCCGTCGTCGCTAAATCTCTTCAATCCCAAGCCAATGTCACGCTCATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAACTTGAGGGCAATGGTTGAGCCGTCCTTTGCAGAAAGGACCTTGATCAACCATGGAGACTACCTCACCAATGGCAACATTGTTATATCCAGTGCTGTCAGTGTGACAGAAACCGAAGTGTTGACTGCCGATGGCAGTCAGATTGGCTATGACTATCTTGTTATTGCCACTGGTCATGCAGATCGTGTCCCCAAAAGTAGGGGTGAAAGACTTGATCAGTATAAAGAAGAAAATCAAAAGATAAAATCTGCTCAATCCATTCTGATTGTTGGAGGAGGTCCCACTGGTGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCTGATAAGAAGCTTACACTGGTGCACAAAGGATCAAGGCTGCTGGAATTCATAGGGGCAAAAGCTGCTGATAAGTCTCTAAAATGGTTGAAATCCAAGAATGTGGAGGTGAAACTAGAGCAGTCAGTTGACTTAAATGCCATCACAGACACAGATGGACACAAGATATATCAAACTTCACTTAGAGATACCATTGAGGCAGATTGTCATTTCCTATGCATAGGCAAACCACTTGCTTCAGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGTTCAGGGAAGGATCAAGGTAGATGAAAATTTGAGAGTCAGGGGCCGGAGCAACATTTTTGCAATTGGAGACATTACAGATATTCCAGAAATCAAACAAGGGTTTTTGGCTCAGCAGCAGGCTGAAGTGGTTGTGAAGAACTTGAAGCTGATAATAGGGGGAGGAAGAGAATGTAGGATGGGCACTTACAAGCCACATTCAGCATTGGCAATAGTTTCACTTGGAAGGTATGATGCTGTGGCAGAGTTCCCATTCTTGACAATCAGTGGAAGAATTCCTGGCTTCATCAAGTCTGGAGATTTATTTGTTGGTAAAACAAGAAAACAAATGGGACTCAACCCTTGA 1080 0.437 MEKQDGHRVVILGGGVAGAVVAKSLQSQANVTLIDPKEYFEIPWANLRAMVEPSFAERTLINHGDYLTNGNIVISSAVSVTETEVLTADGSQIGYDYLVIATGHADRVPKSRGERLDQYKEENQKIKSAQSILIVGGGPTGVELAGEIAVDFPDKKLTLVHKGSRLLEFIGAKAADKSLKWLKSKNVEVKLEQSVDLNAITDTDGHKIYQTSLRDTIEADCHFLCIGKPLASAWLKETVLKNDLDVQGRIKVDENLRVRGRSNIFAIGDITDIPEIKQGFLAQQQAEVVVKNLKLIIGGGRECRMGTYKPHSALAIVSLGRYDAVAEFPFLTISGRIPGFIKSGDLFVGKTRKQMGLNP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01173 359 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 277 IPR023753 GO:0016491
Rops3g01173 359 FunFam apoptosis-inducing factor 2 5 355 - -
Rops3g01173 359 Gene3D - 5 351 - -
Rops3g01173 359 PANTHER APOPTOSIS-INDUCING FACTOR 1 4 357 - -
Rops3g01173 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Rops3g01173 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Rops3g01173 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 249 271 - -
Rops3g01173 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Rops3g01173 359 SUPERFAMILY FAD/NAD(P)-binding domain 6 294 IPR036188 -
Rops3g01173 359 SUPERFAMILY FAD/NAD(P)-binding domain 127 227 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01173 Rops-Chr3 16512486 16516005 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01173 K22745 - gmx:100818210 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01173 3 16512486 16516005 Rops3g01173 3 16512486 16516005 ECH