Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01171 ATGGACATGGAACACCCTCATAATACCAACAATACTACAAGAAGAAGGTCCTGTTTCCGCGGACTCACCTTGACAGTGATTTCCATCTTTCTTCTTTTCATGCTAATCATTAGCATAGCTTGGTCTGTAATGCATCCCCATGATCCTGGTTTTGGGGTGACATCACTTTCTGTCTCCAGCTTCACTGTCTCTGATTCTCAGCTCAGAGGCAAGTATGAGGTGGAACTAACCATGACAAACCCCAACAAGAAAATCCAAGTGATGCTTGACCATTTCAAAGTGTTGGTGCTTTATGGTGATGTCTTGCTCTCTGTGGCTGAAGTGCAACAACAACCCGTGTCCCTTGAGAAGATGAGCAACAAAAGTGTGAAGGTTGACTTGGTAGTGAGGAACTCACCCAAGTTGGTGCATGAGAATCTTGGCAAGGATTGGAACAAAGGGGTGGTGAACTTTAATTTGAAGATGTTTGTTAGAGTTAGATTCTCTAATGGAATCTGGCCAAGCAGGGAAAAGTGTTTGAATGTTAACTGTGGGGACTTGGATGTGGGGTTCTTCTCTCCAAAAGACACTGGCAAGCTTTTGGGTATAGGGAAAGGCTGCTACATACCATAG 612 0.4412 MDMEHPHNTNNTTRRRSCFRGLTLTVISIFLLFMLIISIAWSVMHPHDPGFGVTSLSVSSFTVSDSQLRGKYEVELTMTNPNKKIQVMLDHFKVLVLYGDVLLSVAEVQQQPVSLEKMSNKSVKVDLVVRNSPKLVHENLGKDWNKGVVNFNLKMFVRVRFSNGIWPSREKCLNVNCGDLDVGFFSPKDTGKLLGIGKGCYIP* 204
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01171 203 Pfam Late embryogenesis abundant protein 76 177 IPR004864 -
Rops3g01171 203 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 180 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g01171 Rops-Chr3 16488411 16489256 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01171 - - adu:107477673 223.402