Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01150 ATGACTCGCGTCTTGGTTCAAAGGGGTTCCTCAGGCGGTTCTTCTTCGAATCCAAACCGATCTTCTTCACGGGCTGAGCCGCAGGTTCCGGTTCAACCGGTTTCCAGAGGCGAGGAGAGTGGAGAGGAGATTTCGGGAGTGGTTGTTGGCGATGATGTTTCGGAGAGTAGTGAGTGTAATAAGGGAAGAAGTGAGGACCCTTTGCCGGGTGGTGTTCATTTTGAGCAAAACGATGGTTCTTCTTGTGATGATGATGTAGCTGCTGCTGTTGTTGAGAGTGATGATAGTAGAGAGAGTGATGTTGAGTTAGTGAAAGGGTTGAGTGGATTGAGAGAACAAAGACTTGCTTCAGAAAATGAGAGTTCAAATGGGGATCCTTCTTCCCTGCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCGTGTCCGCCTCCACCTCCTGTTCCGCCTCCAAAGCCTTCTTCTGCAGGTAACCTGAATTTGAGGAGGAATGTGTCGGAGACTTTGAATTCTGGCTGTGTAGGATCGTCTAGGATAGCATCTGCGAGGCCTGTTGCTCCAACTAGGACTTCCCCTACTAGGTCTCGGCCTTCTTCTCCCAGGTCACATAATGAAAACGAGGGGTACAATAGTGCTGATGAACAGAAGCCGTGTTTTGTTTCCTCTTATGATGATTTTGAAAAGGAGCGGCAGTTTGAAATTGATATCAGAAGAGCAAAAGGTTATGAAGTGAAAAAAATGATGGGGGATGGAAATTGTCTTTTCCGTGCTGTTGCAGATCAGGTGTTTGGGGACTCTGAATTGTATGATTTGGCCAGACACATGTGCATTGATTATATGGAGCAAGAGAGAGATCACTTTTCTCAATTTATAACTGAAGGTTTCACATCATACTGTAACAGGAAGAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAAGCAATGAGTGAAATGTATAATCGTCCGATTCATATATACTCCTACACTACAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACACACCACCAATTCGACTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGCGCTTGACAATTGGTGCTGGACTTGGGTTCAGCTGTCTTCGTGGAACTAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGATCAACAGATCAATAACGCACTTTTAGCTGAGGGACGATTTTACTCTGATATTGAGCTGACAGAGAAGGAAATTGAACGCATGGTGATGGCAATTTCTCGAGCTGAGTATACTGCAGATGGTACATTTAAACAACAGCTTGGCCATAGAGAGTCCTCTACCTCAAATGCTGAACCATCATCTTCTGGAGCAACAGGATCATCTGGCACTGATCGCAAGATGGAACATGGGAAAGAGCATGGTTCTGTTCTTAGCAGCGGGGTGCAGATGTTACTATCAATGGGATTTAGTTACCTCCAAGCGATTGAAGCTTACAGCATATTTGGGGATGATGTTGATTCCATGGTTTGTTACCTGTTAGAAACTGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATAA 1593 0.4501 MTRVLVQRGSSGGSSSNPNRSSSRAEPQVPVQPVSRGEESGEEISGVVVGDDVSESSECNKGRSEDPLPGGVHFEQNDGSSCDDDVAAAVVESDDSRESDVELVKGLSGLREQRLASENESSNGDPSSLLGGGGGGGGGSCPPPPPVPPPKPSSAGNLNLRRNVSETLNSGCVGSSRIASARPVAPTRTSPTRSRPSSPRSHNENEGYNSADEQKPCFVSSYDDFEKERQFEIDIRRAKGYEVKKMMGDGNCLFRAVADQVFGDSELYDLARHMCIDYMEQERDHFSQFITEGFTSYCNRKRRDKVYGNNVEIQAMSEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGTNVDKDQVKAAIKAQQDQQINNALLAEGRFYSDIELTEKEIERMVMAISRAEYTADGTFKQQLGHRESSTSNAEPSSSGATGSSGTDRKMEHGKEHGSVLSSGVQMLLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01150 530 MobiDBLite consensus disorder prediction 114 128 - -
Rops3g01150 530 Pfam OTU-like cysteine protease 248 358 IPR003323 -
Rops3g01150 530 MobiDBLite consensus disorder prediction 1 81 - -
Rops3g01150 530 CDD OTU_plant_OTU6-like 237 363 - -
Rops3g01150 530 SUPERFAMILY UBA-like 476 517 IPR009060 GO:0005515
Rops3g01150 530 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 478 518 IPR015940 -
Rops3g01150 530 MobiDBLite consensus disorder prediction 441 476 - -
Rops3g01150 530 ProSiteProfiles OTU domain profile. 241 364 IPR003323 -
Rops3g01150 530 MobiDBLite consensus disorder prediction 1 29 - -
Rops3g01150 530 MobiDBLite consensus disorder prediction 441 465 - -
Rops3g01150 530 MobiDBLite consensus disorder prediction 108 214 - -
Rops3g01150 530 FunFam OTU domain-containing protein 5 222 374 - -
Rops3g01150 530 SUPERFAMILY Cysteine proteinases 230 364 IPR038765 -
Rops3g01150 530 Gene3D - 223 374 - -
Rops3g01150 530 MobiDBLite consensus disorder prediction 139 153 - -
Rops3g01150 530 MobiDBLite consensus disorder prediction 156 205 - -
Rops3g01150 530 PANTHER OTU DOMAIN CONTAINING PROTEIN 168 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01150 Rops-Chr3 16094535 16101398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01150 K12655 - gmx:100809162 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01150 3 16094535 16101398 Rops3g01150 3 16094535 16101398 ECH