Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01135 ATGGGCAAAAAGGTAAACTGGAGCTGGAGTTCAGCGTTAATCGGAGCAGCATCAGCGGTGGCAGCAACGGCGGTGTTATCAGCAAAACCCAAAGACCCAACCTTCCACCTCATATCCATAAACTTCACAAACCTGAAACTCAACCTTCCAGTTCTCGACGCTGAAGTTCTCTTAACCGTCCACGTCACCAACCCAAACATAGCCCCAATCCACTACTCCTCTACCACCATGTCCATCTTCTACGCCGGCTCACTCCTCGGCTCGGCACAGGTCCAAGCCGGCTCACAGCCACCTCGCTCATGCCAGCTCCTCCGCCTCCCGGCTCGGCTCCAAGCCCTCCAGTTCGCTCAACACGCCACGCGCTTCCTCTCCGATGTTGCAAAACGCGAGATGCTCCTTGACGCTGCCGTTGATATCGCCGGCACCGCTAAGGTATTATGGTGGGACCATCACTTCAAGGTCCACGTGGATAGTCACATCACCGTTGATCCTGTTTTTCTTGATGTTATTGATCAGGAAAATACCGCTGAACTTGAACTCTTTGCATCAGCTTAG 555 0.5333 MGKKVNWSWSSALIGAASAVAATAVLSAKPKDPTFHLISINFTNLKLNLPVLDAEVLLTVHVTNPNIAPIHYSSTTMSIFYAGSLLGSAQVQAGSQPPRSCQLLRLPARLQALQFAQHATRFLSDVAKREMLLDAAVDIAGTAKVLWWDHHFKVHVDSHITVDPVFLDVIDQENTAELELFASA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01135 184 SMART why 40 153 IPR013990 GO:0009269
Rops3g01135 184 SUPERFAMILY LEA14-like 21 161 - -
Rops3g01135 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 165 - -
Rops3g01135 184 Gene3D - 13 164 - -
Rops3g01135 184 Pfam Late embryogenesis abundant protein 59 156 IPR004864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01135 - - gmx:100782945 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01135 3 15799890 15800573 Rops3g01135 3 15799890 15800573 ECH