Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01115 ATGTTGCAAACTGCAAGCAGAAATCAAGCCACTGGTGCTACCATAGTGAAGTGCCCTTCCTCTCTTGGGTCTGTGAAGAGTGTTTCCAGATCTTTTGGCTTGAAGTCATCCTCTTCATTTAGAGTCACTGCCATGGCTGCTTACAAGGTTAAGCTGATTGGCCCAGATGGAGAAGAGAATGAATTTGAAGCCCCAGATGATGCTTACATCTTGGATTCAGCAGAGAGTGCTGGAATTGATCTCCCTTATTCATGCCGTGCCGGAGCATGCTCTACCTGTGCTGGGAAGATTCGGTCTGGTTCAGTGGATCAATCTGATGGCTCATTCCTGGATGAAAATCAGCTGAAGGATGGCTTTGTGCTTACCTGTGTCTCCTATCCAACTTCAGACTGTGTAATTGAAACTCACAAGGAACAAGATCTCTACTGA 429 0.4615 MLQTASRNQATGATIVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAAYKVKLIGPDGEENEFEAPDDAYILDSAESAGIDLPYSCRAGACSTCAGKIRSGSVDQSDGSFLDENQLKDGFVLTCVSYPTSDCVIETHKEQDLY* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01115 142 NCBIfam ferredoxin [2Fe-2S] 46 142 IPR010241 GO:0009055|GO:0022900|GO:0051537
Rops3g01115 142 Gene3D - 45 142 IPR012675 -
Rops3g01115 142 Pfam 2Fe-2S iron-sulfur cluster binding domain 55 128 IPR001041 GO:0051536
Rops3g01115 142 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 85 93 IPR006058 GO:0051537
Rops3g01115 142 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 48 139 IPR001041 GO:0051536
Rops3g01115 142 SUPERFAMILY 2Fe-2S ferredoxin-like 43 139 IPR036010 GO:0051536
Rops3g01115 142 PANTHER FERREDOXIN 20 142 - -
Rops3g01115 142 CDD fer2 50 134 IPR001041 GO:0051536
Rops3g01115 142 FunFam Ferredoxin 46 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01115 Rops-Chr3 15277216 15279690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01115 K02639 - gmx:100785611 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01115 3 15277216 15279690 Rops3g01115 3 15277216 15279690 ECH