Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01112 ATGGCTAAACCCCACAACCTCATTCTCCTTCTTCTGCTCTTCACCACTCTCCAATCTTCTTCTCGTTCCGTTGCAGCATCACCCTCGGATCACTTCTACAACGTTGGGGATAGTGTCCCATTTTTTGTCAACAAAGTAGGACCCTTCAACAATCCCAGTGAGACTTATGAATACTATGATTTGCCTTTCTGCACCCCAGACCCAATAGTGAGAAAGAAAGAGTCACTTGGGGAAGTTCTCAATGGTGATCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCAGGGAGGACAAGATTGATGAGACCTTGTGCCAAAATAAGATTACAATTGATCAAGTTGCTAACTTGAAGCAAGCTATAAACAGCGACTTCTACTTCCAGTTTTACTTGGATGATCTTCCATTTTGGGGGTTCATTGGGAAACTTGAAGAGGATAGCTGGACTCCTGGTGGGGGAGGGTCAAATTATTACCTTTTTACACATGTTCAATTTGATGTTCTTTACAATGGGAACCGAATCATACAAGTAAATGCATTTGGTGATCCGAATCGAGCTGTAGATATAACAAAAGATGTTGATATTGATGTTAAGTTTACTTATTCTGTCATCTGGAATGCCACTGAACTACCTTTTGAGAACAGGATGGACAGATACTCAAGAGCTGCATTGCTGCCTGTCTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCAATTGTCACCATTTTCCTTTTGATTGGTTTGCTTGCCCTGCTTTATATGCGGCATTTGAAGAGTGATTTGAAAAAGTATTCTAATGCAAATGAAGAAGATAGGGAGGTCGGTTGGAAGTCCATCCATGGCGATGTATTCAGACATCCTCCAAATTCGTCCTTATTTTTTGCTGTTGTGGGAACGGGTACCCAATTGCTAATCTTGCTCTGTGTCTTATTCTTTCTAACATTTATGGGCACCCTCTATCCCTACAACCGCAGAGGACTGTTAAATTGTCTTGTCCTGCTATATGTTATGTCGTCATTTTTTGCTGGGTACTCAGCGTCATCCTTCCACGGCCAGTTTGCTGAGAATGGATGGTTCCAGGAAAGGAGTGTTAGTCTAGCAGGGGTTCTTTACATTGGACCAGTGTTTGTTGTAGTCTCTATCCTCAACATTATTGCAATATCTTACAGGGCCACAACTGGACTCCCATTGGGCACAATTATTGTGATGCTTGTTTTATTCACATTTGTTGCCATCCCATTGCTTGCATTCGGTGGAGTGATTGGATACCGCTTTAGATCTGAATTTCAGGGGCCCTCTGCTACAAAGAGACATCCTAGAGAGATTCAACGGCTTGCTTGGTACAGGAGAACACCATTTCAAATGTTTATTGGGGGCTTTGTGCCTTTTAGTGCAATTGTCCTGCAATTACACCAGGTGTATGCAAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGCTTGCCACACTCATCACTGTCATTGTGATTATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGATCTGTGCTATGTGGTGGCTCAACAGCTATTTTCATGTTCGGATATTGTATATACTTCTATGTGAAATCAAGTATGAGTGGATTCTTACAGCTATCCTTCTTCATTGGCTATAATGCATGCATGTGCTATGCTTTCTTCCTAATATTTGGTGCCATCAGTTTCCAAGTTTCATTGCTATTTGTTCGCCATATATACAATGGTGTTAAGAGAGAGTGA 1782 0.4141 MAKPHNLILLLLLFTTLQSSSRSVAASPSDHFYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCTPDPIVRKKESLGEVLNGDRLSNALYEFKFREDKIDETLCQNKITIDQVANLKQAINSDFYFQFYLDDLPFWGFIGKLEEDSWTPGGGGSNYYLFTHVQFDVLYNGNRIIQVNAFGDPNRAVDITKDVDIDVKFTYSVIWNATELPFENRMDRYSRAALLPVYRQVHWFSFINSIVTIFLLIGLLALLYMRHLKSDLKKYSNANEEDREVGWKSIHGDVFRHPPNSSLFFAVVGTGTQLLILLCVLFFLTFMGTLYPYNRRGLLNCLVLLYVMSSFFAGYSASSFHGQFAENGWFQERSVSLAGVLYIGPVFVVVSILNIIAISYRATTGLPLGTIIVMLVLFTFVAIPLLAFGGVIGYRFRSEFQGPSATKRHPREIQRLAWYRRTPFQMFIGGFVPFSAIVLQLHQVYASMWGYKIYTLPSILLATLITVIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYCIYFYVKSSMSGFLQLSFFIGYNACMCYAFFLIFGAISFQVSLLFVRHIYNGVKRE* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01112 593 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 25 591 IPR004240 GO:0016020
Rops3g01112 593 Pfam Endomembrane protein 70 55 550 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01112 Rops-Chr3 15245788 15250924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01112 9 593 Miscellaneous Gene Families AT2G01970 49.066 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01112 K17085 - gmx:100818419 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01112 3 15245788 15250924 Rops3g01112 3 15245788 15250924 ECH