Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01111 ATGATGGAGCAGCTTCCTGTTGAAGTGATTGGGAACATACTATCCCATTTGAGGGCTGCAAGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGAGACAAGCATGTTGCAAACACCTCCTCACACTCTCCTTCAGCTCCAATGATTGGCCTATTTACCGTGATTTGACAACTACCCGCCTTGAGATTTTGATCACACAAACCATTTTTCAGACCTCAGGGTTGCAGGCCCTCTCCATTTTGATGGAAGACGTGGATGAATTCTCGGCTTCCACGGTTATTGCTTGGCTCATGTACACCAGGGAAACTCTGAGGCAATTGTTCTATAATGTGAAGACCATGCCTAATGTTAACATTCTTGAAATATGTGGTAGACACAAGCTGGAAGTGCTAGATCTGGCTCATAATCCAATTGTAGGGGTTGAGCCTAATTATCAGAGATTCCCTTATTTGAAATCTCTTTCCTTGAGTTATGTCAGTATATCCGCGTTGGATCTGAATCTTTTGGTATCTGCATGCCCAAAGATTGAAACTTTGGAGCTTGTTAATCCAGAGATTGCAATGTCTGATGCACAGGTGACTGTTGAATTGAGTAGCTCAACACTGAAGAGTGTATATGTAGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGGATTGGGTGTCTGCACTTGAAAGATTGCGCTCTTGAGGTTTTTGAACTCATTGGCAAGGGGACCCTGAAGCATTTTAGGATTGATGATGTTAGTGTTATACATCTTGATATTGGCGACATAGTTGAGAATCTTGAGAGTGTGGATATCAGCAACTTCACCATTATATGGCCGAAGTTTTACCAGATGATTTCAAGATCATTGAATTTAAAGAGGCTTCGTCTTTGGGATGTGATGTTTGACGATGAGGATGAGGTTGTAGACTTGGAAACAATCGCCACTTTCTTTCCACACCTGAGCCATTTATCTCTGAGTTATGATGTGAGAGATGGAGTGCTTAACTATGGTTTACAAGGCTCTTCCTATCTGGAGAATGTTGTTGTCTTGGAGCTTGGTTGGACTGTGATCAATGATCTTTTATCCCACTGGGTTGAGGGGCTGCTTAAGCGATGCCCCAATCTCAAGAAGTTGGTCATTCATGGGGTTGTTTCTGAGGCCAAGTCTGATGAAGAATGCAAGATGTTGGCCAATTTCACCACATCCATGGTTGAGCTAATGAGGAGATACACACATGTAGATCCACATTTTAAGTATGAATAG 1263 0.4252 MMEQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLLTLSFSSNDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVIAWLMYTRETLRQLFYNVKTMPNVNILEICGRHKLEVLDLAHNPIVGVEPNYQRFPYLKSLSLSYVSISALDLNLLVSACPKIETLELVNPEIAMSDAQVTVELSSSTLKSVYVEAISLDKFILEADGIGCLHLKDCALEVFELIGKGTLKHFRIDDVSVIHLDIGDIVENLESVDISNFTIIWPKFYQMISRSLNLKRLRLWDVMFDDEDEVVDLETIATFFPHLSHLSLSYDVRDGVLNYGLQGSSYLENVVVLELGWTVINDLLSHWVEGLLKRCPNLKKLVIHGVVSEAKSDEECKMLANFTTSMVELMRRYTHVDPHFKYE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01111 420 SMART fbox_2 5 46 IPR001810 GO:0005515
Rops3g01111 420 Gene3D - 1 40 - -
Rops3g01111 420 SUPERFAMILY RNI-like 39 383 - -
Rops3g01111 420 Pfam F-box-like 3 41 IPR001810 GO:0005515
Rops3g01111 420 CDD F-box_SF 3 38 - -
Rops3g01111 420 Gene3D Ribonuclease Inhibitor 41 414 IPR032675 -
Rops3g01111 420 SUPERFAMILY F-box domain 2 57 IPR036047 GO:0005515
Rops3g01111 420 PANTHER F-BOX PROTEIN-LIKE 3 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01111 Rops-Chr3 15237532 15239562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01111 - - gmx:100804357 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01111 3 15237532 15239562 Rops3g01111 3 15237532 15239562 ECH