Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01108 ATGGGAATGGTTTATCAGGCCACTCAACTTCCCCCTCCAAACAGTGATGATTCACAAGATAACTATCTTCCTGTGGTTTCACCAAGAATCAGACTCAGTGATGGAAGGTACCTTGCTTACAGAGAAAGGGGTGTCCCCAAAGACAAAGCAAAACACTGCATCATCATTGTCCATGGCTTTGGAAGCTCCAAAGATATGAACTTTCTGGCTCCCCAAGAACTAATAGATGAATTGGGTATATATATTCTGCAATATGATCGAGCTGGGTATGGAGAAAGTGATCCAAACCCCAAACGTTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCAGTTACAAATAGGATCAAAATTTTATGTGATTGGAGTCTCAATGGGATCACATGCTACTTGGAGTTGTCTGAATTACATCCCCAACAGGTTAGCAGGTGTAGCTATGATAGCCCCAGTTATCAACTATGAGTGGCCTTCACTTCCTGAGAGTCTGGTAAGGGAGGACTATAGGAGGAGACTTGTAAAGTGGTCTATGTGGCTTGCAAAATATTCCCCTAGACTGTTGCATTGGTGGGTGACACAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAATCCAGCATTCTTCAACAAAAGAGATATAGAAATTTTAAAGATAATTCCTGGGTTCCCAATGCTCACCAAGGACAAATTGAGGGAACAAGTTGTTTTTGACACTCTAAGGGGTGACTGGATAGTGGCCTTTGGCAACTGGGAATTTGACCCATTGAAGCTAAGTAATCCATTCCCTCATGATAGAAGTTCAGTTCACATTTGGCAGGGCAATGAAGATAAGGTAGTGCCCTCTCAAATCCAGAGATTCATTTCAGGGAAGCTACCCTGGATACAATATCATGAAGTTCCTGATGGTGGCCATTTGATTGTACACTATAGTGGCTTATGTGAGGCCATTTTGAAGGCACTTTTACTTGGAGAAGAAAATCTCTCATATAGACCTAGACCAGCAATTCTTGTATCTTGA 1026 0.4181 MGMVYQATQLPPPNSDDSQDNYLPVVSPRIRLSDGRYLAYRERGVPKDKAKHCIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADQLQIGSKFYVIGVSMGSHATWSCLNYIPNRLAGVAMIAPVINYEWPSLPESLVREDYRRRLVKWSMWLAKYSPRLLHWWVTQKWLPSNSVIEKNPAFFNKRDIEILKIIPGFPMLTKDKLREQVVFDTLRGDWIVAFGNWEFDPLKLSNPFPHDRSSVHIWQGNEDKVVPSQIQRFISGKLPWIQYHEVPDGGHLIVHYSGLCEAILKALLLGEENLSYRPRPAILVS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01108 341 MobiDBLite consensus disorder prediction 1 21 - -
Rops3g01108 341 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 2 327 - -
Rops3g01108 341 FunFam Alpha/beta-Hydrolases superfamily protein 24 324 - -
Rops3g01108 341 Pfam Alpha/beta hydrolase family 54 309 IPR000073 -
Rops3g01108 341 SUPERFAMILY alpha/beta-Hydrolases 24 310 IPR029058 -
Rops3g01108 341 Gene3D alpha/beta hydrolase 19 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01108 Rops-Chr3 15184036 15186336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01108 - - gmx:100803294 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00547 7 6981457 6987454 Rops3g01108 3 15184036 15186336 ECH
Rops3g01108 3 15184036 15186336 Rops3g01108 3 15184036 15186336 ECH
Rops7g00547 7 6981457 6987454 Rops3g01108 3 15184036 15186336 PCT