Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01103 ATGGCGCGAGTGGATTTGGATGGAAACCCGATCAAGACGTTGTCGATATGCATGATCGGCGGCGCAGGGTTCATCGGATCACACCTCTGCGAGAAGCTCATGGCTGAAACCTCCCACATAGCCATGGTCGTCGATGTCTCCTCCGAGAAGATCAACCACCTCCTCGACAAATCACTCCCTTGGGGCGACCGCATCGAGTTCCATCAAATGAACATCAAGAGCGATTCACGCCTCGAAACTCTCGTCAAATCTTCCGATCTCACGATTAATCTTGCTGCGATTTGTACGCCGGCAGATTATAACACGCGGCCGTTGGACACCATTTACAGTAATTTCATTGATGCGATTCCGGTGATTAAATACTGCACTGAGAACAACAAGCGTTTGATACATTTTTCTACGTGTGAGGTGTTTGGGAAGACTATAGGTAGCTTTCTCCCTGAGGAATATCGACAGGACCCCAAATATTTCATGCTCAAAGAAGATGCCAGTCCTTGTATATTTGGTCCGGTTGAGAAACAGAGATGGTCTTATGCCTGTGCAAAGCAAATGACTGACAGGCTTATATATGCTGAGCACGCTGAGAATGGCCTCAAGTTCACCATTGTGAGACCTTATAACTGGATTGGCCCAAGAATGGACTTCATTCCTGGTGTGGATGGCCCACTTGATGGTGTCCCAAGAGTTTTAGCTTGCTTCAGTAATAATCTCCTGCGTGGGGAGCCTCTCAAACTTGTTGATGGTGGACGATCAAAGAGAACCTTTCTCTACATCAAAGATGCAGTTGATGCTGTTTTGTTAATGATTGATAACCCTGAGAGAGCAAATGAGCATATCTTTAATGTGGGAAACCCAGACAATGAAGTATCTGTGAAGGAACTAGCTGAGCATATGATAAAGGTTTATGCTAAGGTGGTTGGTGTACCTGAGTCTAGTCTATCAACTCTGGATGTGAGTTCAGAGGATTTCTACGGTAAAGGCTATGATGACAGTGATAGGCGCATCCCTGACATGACAATTATCACCAGGCAGCTTGGTTGGAAGCCAAGGACACCTCTTCATGAAGTGTTGGATGTTACCCTCCAATATCAACACCAGACATATTCTCAAACTATTAAGAACGAACTATCAAAACCGTCAAATTGA 1146 0.4538 MARVDLDGNPIKTLSICMIGGAGFIGSHLCEKLMAETSHIAMVVDVSSEKINHLLDKSLPWGDRIEFHQMNIKSDSRLETLVKSSDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKYCTENNKRLIHFSTCEVFGKTIGSFLPEEYRQDPKYFMLKEDASPCIFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPLDGVPRVLACFSNNLLRGEPLKLVDGGRSKRTFLYIKDAVDAVLLMIDNPERANEHIFNVGNPDNEVSVKELAEHMIKVYAKVVGVPESSLSTLDVSSEDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLHEVLDVTLQYQHQTYSQTIKNELSKPSN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01103 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 366 IPR036291 -
Rops3g01103 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Rops3g01103 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 15 367 - -
Rops3g01103 381 Gene3D - 14 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01103 Rops-Chr3 15136777 15139419 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01103 K12449 - gmx:100790039 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01103 3 15136777 15139419 Rops3g01103 3 15136777 15139419 ECH