Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01051 ATGGTAACAGAGATGGTGAATGTTCTGCTTCTGCATCCCATAGTCACGAAGCCATACGTCGCCGTTCGATGCTCTCGTAGCAGCAGCGTGCAGGAGATAGAAGAAAAGAACTCCGAATTAGGTTCGGAGCTCCGACATTCACTACCGTTCGCTCCATTGAAGGCGGCGAAGAGGGTGGTTCTGGTGAGGCATGGGCAAAGCACATGGAACGCCGAAGGTAGAATCCAAGGTAGCTCCGATTTCTCTGTTCTCACGAAGAAAGGTGAGTCTCAGGCTGAGACTTCACGCCAAATGCTCATTGATGACAACTTCGATGCTTGCTTCGCGAGTCCTTTGCAACGATCCAAGAGAACCGCTGAAATCATTTGGGGACCTCGCCAACAACCTATAACTCCGGAATTTGAATTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGTTGAAGCATGAGGGAAAGGAAAGATTTGGTTCTGCTTATCGTCAATGGCAGATGGATGCTGCAAATTTCATCATTGATGGTCATTATCCAGTTAGAGAGTTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCCTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCCCTTGTTGCCACAGCAATTGGTCTGGGGGCTGAGTATTTTAGAGTTTTACTTCAGAGCAATTGTGGCGTAAGTGTGTTGGATTTCACCCCAAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTGTTGCTGGCGGGAAAACTGGAGGTAGAGAGACAAGTAAGCGTATCATACTTGTTTGTAGTGGATCAACACAAGGAAATACAGAGGATGGTTTTCCTTTTGCTGGTGATCAACAGTTGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAGTCCCATAATTAGCAGTCCTAACAAAGCTTGTGTTGAGACAGCCACGGCCATTTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCGCGCTATGTTGAGATGAAGGAGATGAGAAACCTTGATATTGAAACAATCTTTAAATCATCCAAAATGGATACATCCAGTTTTCCGCCATTTGAGCCTGGGTGGTTAAATAAAGTTGAAGATGGATTGAGAACAACATTATGGGATCAATCTGGAAAAGCCTGGCGATCCTTATTAGATGAAATATCTGATGAATCTAGGCCTAAAGATATTGTAGTTGCCGTCGGTCATCCTGCGATCCACATAGCACTAATGGCGCACTGCCTTAATTTGACCAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGTGTTAGTGTCCTTGACTTCCCTGATGGACCTAAGGGTAGAGGCGTTATCAGGTGCATAAATTATACTGCCCACCTGGGAAGATGGTCCATCCCTATTACAAGATCAACAGAGGATGGTGAAGAGTTTTAA 1506 0.4555 MVTEMVNVLLLHPIVTKPYVAVRCSRSSSVQEIEEKNSELGSELRHSLPFAPLKAAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAETSRQMLIDDNFDACFASPLQRSKRTAEIIWGPRQQPITPEFELREIDLYSFQGLLKHEGKERFGSAYRQWQMDAANFIIDGHYPVRELWERARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGAEYFRVLLQSNCGVSVLDFTPRSEGGSPHICLNRLNQTPGSPVAGGKTGGRETSKRIILVCSGSTQGNTEDGFPFAGDQQLNMLGVIQSQKSAELLLDLKVSPIISSPNKACVETATAISQVQEAADCLGADCVPRYVEMKEMRNLDIETIFKSSKMDTSSFPPFEPGWLNKVEDGLRTTLWDQSGKAWRSLLDEISDESRPKDIVVAVGHPAIHIALMAHCLNLTKEWLGSFHLDAGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRSTEDGEEF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01051 501 FunFam Phosphoglycerate mutase 57 261 - -
Rops3g01051 501 SMART PGAM_5 276 438 IPR013078 -
Rops3g01051 501 SMART PGAM_5 58 212 IPR013078 -
Rops3g01051 501 CDD HP_PGM_like 58 245 IPR013078 -
Rops3g01051 501 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 272 467 - -
Rops3g01051 501 SUPERFAMILY Phosphoglycerate mutase-like 274 489 IPR029033 -
Rops3g01051 501 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 268 488 - -
Rops3g01051 501 Gene3D - 269 488 IPR029033 -
Rops3g01051 501 Pfam Histidine phosphatase superfamily (branch 1) 277 468 IPR013078 -
Rops3g01051 501 Pfam Histidine phosphatase superfamily (branch 1) 59 242 IPR013078 -
Rops3g01051 501 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 61 70 IPR001345 GO:0003824
Rops3g01051 501 CDD HP_PGM_like 276 476 IPR013078 -
Rops3g01051 501 Gene3D - 57 245 IPR029033 -
Rops3g01051 501 SUPERFAMILY Phosphoglycerate mutase-like 57 249 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01051 Rops-Chr3 13939976 13944154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01051 K22200 - gmx:100794084 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01051 3 13939976 13944154 Rops3g01051 3 13939976 13944154 ECH