Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01043 ATGGGTACCCTGCTTCCAACCTCAACACCAGGACATGAAACATCAGAGAATCCAAATGGTTCGCAACAGATTCACCACCAAAAAGATGTTGATGCAGGAGCTCTCTTTGTCCTCAAATCAAAAGGTTCTTGGATGCACTGTGGTTACCACTTGACAACATCGATAGTGGCTCCACCTCTTCTAAGTCTTCCTTATGCTTTCACATTTCTTGGATGGACGGCTGGAATTTTATGCCTAGTGATTGGAGCTGTCGTCACGTTCTATTCATACAATTTAATATCTTTGGTGCTTGAGCACCATGCTCAGTTGGGGAATCGTCAGCTACGATTTCGAGACATGGCTCGCGATATTTTAGGTCCAAGATGGGGTCGTTATTTTGTGGGGCCAATTCAGTTTGCAGTCTGCTATGGTGTTGTAGTGGCTTGTATTCTTTTGGAAGGACAATGCATGAAGGCAGTTTACCTACTGTCAAACCCAAATGGGACCTTGAAGCTTTACGAGTTTGTAATCATATTTGGTTGCTTCATGCTGATTATGGCTCAAATCCCATCTTTCCACTCATTGAGGCACATTAATCTCGTGTCATTGGTTCTGTGTTTAGCCTATAGTGCTTGTGCTACTGTTGGTTCCATATACATTGGAAACACATCAAAAGGACCAGAAAAGGATTATTCTTTAAAAGGTGACACAGTGAATCGCTTATTCGGAATCTTCAATGCTGTTGGCATCATTGCCACCACTTATGGAAATGGAATAATTCCAGAAATTCAGGCAACATTAGCACCACCCCTAAAAGGAAAGATGTTAAAGGGACTAAGTGTTTGTTATGCTGTCATTACAGTCACTTTCTTTAGTGTAGCTATATCTAGTTATTGGGCATTTGGCAACCAATCTGAAGGCCTAATCTTAAACAACTTTGTGGACAATGGGAAACCTTTAGTACCCAAATGGTTTATTTACATGACCAACATTTTCACCATAGCACAATTATCAGCAGTTGCTGTGGTATACTTGCAGCCTACAAATGAAGTGCTAGAGCAAACATTTGGGGACCCAAAAAGCCCTGAATTATCCTACCGCAATGTAATCCCCAGAGTGATTTCTCGGTCATTAGCTATTAGTATTGCTACCACTATAGCTGCTATGCTTCCATTTTTTGGGGACATAAACTCTCTCATAGGAGCTTTTGGCTTTATGCCACTTGACTTTATTTTGCCAGTGATTTTCTTCAATTTGACATTTAAGCCATCTAAGCGAAGCCCCATTTTCTGGTTGAATGTAACTATTGCTGTGACTTTCTCTACATTGGGAGGTATAGCAGCAGTTGCAGCAGTTAGACAAATAGTTCTTGATGCCAATAATTACCAATTATTTGCTAATGTATGA 1386 0.4069 MGTLLPTSTPGHETSENPNGSQQIHHQKDVDAGALFVLKSKGSWMHCGYHLTTSIVAPPLLSLPYAFTFLGWTAGILCLVIGAVVTFYSYNLISLVLEHHAQLGNRQLRFRDMARDILGPRWGRYFVGPIQFAVCYGVVVACILLEGQCMKAVYLLSNPNGTLKLYEFVIIFGCFMLIMAQIPSFHSLRHINLVSLVLCLAYSACATVGSIYIGNTSKGPEKDYSLKGDTVNRLFGIFNAVGIIATTYGNGIIPEIQATLAPPLKGKMLKGLSVCYAVITVTFFSVAISSYWAFGNQSEGLILNNFVDNGKPLVPKWFIYMTNIFTIAQLSAVAVVYLQPTNEVLEQTFGDPKSPELSYRNVIPRVISRSLAISIATTIAAMLPFFGDINSLIGAFGFMPLDFILPVIFFNLTFKPSKRSPIFWLNVTIAVTFSTLGGIAAVAAVRQIVLDANNYQLFANV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01043 461 Pfam Transmembrane amino acid transporter protein 41 447 IPR013057 -
Rops3g01043 461 PANTHER OS05G0424000 PROTEIN-RELATED 39 445 - -
Rops3g01043 461 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01043 Rops-Chr3 13717676 13725811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01043 133 461 Organic Solute Cotransporters AT1G08230 64.653 1.18e-150 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01043 - - gmx:100791114 812.372