Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01035 ATGAAGAATGAAGGCACAAGAAGGAGTGTGTGCTGGTGCATTGATTATTGGTGTTGGATGATTGGGTATGTGTGCACCATTTGGTGGCTTTTTTCTTTCTTGTCAACTACATTACCTGGTTTTGATGTACCAGAGTCACCTGGGGTGAGGCTGAACCGTGAGGGAGTCACTGCACTTCACCCTCTTGTTCTTGTACCTGGTATTGTAACTGGTGGCCTTGAACTCTGGGAAGGGAGGCCTTGTGCTGAAGGCCTTTTCAGAAAACGCTTGTGGGGTGACAGTTTTTCTCAGATCCTCAAAAGGCCTTTATGCTGGTTAGAGCACCTCTCTCTGCATAATGAAACTGGGCTGGACCCACCAGGAATTCGAGTCAGGGCAGTGCCAGGGCTTGTTGCTGCAGACAACTTTGCTTCTGGTTATCTAGTGTGGGAAGTTTTAATTGAAAATTTGGCTAGAATTGGTTATGAAAGGAAGAACTTGTACATGGCTGCCTATGACTGGAGACTGTCTTTTCAAAATACAGAGATTCGAGACCAAGCTCTTAGTAAATTGAAGAGTAAAATAGAGCTTATGTTTGTAACAAATGGCTATAAGAAAGTGGTAGTTGTGCCTCAATCTATGGGGGCTATTTATTTCCTTCATTTCCTAAAATGGGTTGAGACACCTCCTCCCATGGGAGGGGGTGGTGGTCCAGGTTGGTGTGACAAGCACATCAAAGCAATCATGAATATTAGCCCGGCATTTCTTGGTGTTCCAAAGGCAGTCAGCAACATATTTTCAGCTGAAGGCAGTGATGTTGCGTTTGTCAGAGCCGTGGCTTCTGGCATTTTAAATTTTGATTACCTTGGTCTTCAAACGGTTGAACATGTCTTGCGGGTATGTAGAACTTGGGATTCGATCATCTCCTTGATGCCAAAAGGTGGTGAAACTATCTGGGGTAACTTGGATTGGTGTCCTAAAGAATGGAGTAACTGTGATCAGGAAAAGAAAGGATATGCGAAGCACTTTGTAAGTGACAATACTTATATCTGCATTAATATGCAGAAAGGTCTTCATGAAAAAGAACCAATGAAGTATGGAAGAATAATCTCTTTTGGCAAGGCAGTCTCACAGTTACTTGCTTCACTTCTCACTACACTTGATTCAGAGCAAGGAATTTCATGGGAAAGTAGTTCTGCTACTTTTAACTTATCATGTGAGGATGTTTGGACTGAATGCGATGAGATGAGCAGAGAAAGCATCCAAGAAGTTGCTAAAACAAAGGCTTATACAGCAAGAACTGTTTTTGATCTACTTAATTTTGTGGCTCCAATAATGATGAAGCGTGCTGAGGCTCACTTCTCTCATGGGATTGCAGAGGACTTAGATGATCCTAAATATGCCCATTATAAATACTGGTCGAATCCACTTGAGACCAAACTACCCAATGCCCCCCATATGGAAATATACTGTCTATATGGTGTTGGAATTCCTACTGAAAGATCACACGTACACAAGTTTTCCCCTTCAGACAAGTGCAAGCGTGTTCCTTTCCAAATTGATAGTTCAGAAGATGGAGAAAAGGGGAGTTGGTTACAAAAGGGTGTTTATTTTGAGGATGGTGATGAGAGTGTACCTGTTATAAGTTCAGGGTTCATGTGTGCCAAAGGATGGCGTGGAAGAACACGGTTCAATCCGTACGGCATGGATACATACATAAGAGAGTATCAGCACAAACAACCAAGTAGTCTTCTTGAGGGGAGAGGTCTAGATAGTAGAGCACATGTCAACATTATGGGAAATGTTGCCTTGATTGAAGATGTTTTAAGAGTTGCTGGTGGTGCCACTGGTGCAGATATTGGAGGTGATAGGATATTTTCAGATATCATGAAGATGTCTGAGAGGATAAATCTTAGACTGTGA 1902 0.4248 MKNEGTRRSVCWCIDYWCWMIGYVCTIWWLFSFLSTTLPGFDVPESPGVRLNREGVTALHPLVLVPGIVTGGLELWEGRPCAEGLFRKRLWGDSFSQILKRPLCWLEHLSLHNETGLDPPGIRVRAVPGLVAADNFASGYLVWEVLIENLARIGYERKNLYMAAYDWRLSFQNTEIRDQALSKLKSKIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGPGWCDKHIKAIMNISPAFLGVPKAVSNIFSAEGSDVAFVRAVASGILNFDYLGLQTVEHVLRVCRTWDSIISLMPKGGETIWGNLDWCPKEWSNCDQEKKGYAKHFVSDNTYICINMQKGLHEKEPMKYGRIISFGKAVSQLLASLLTTLDSEQGISWESSSATFNLSCEDVWTECDEMSRESIQEVAKTKAYTARTVFDLLNFVAPIMMKRAEAHFSHGIAEDLDDPKYAHYKYWSNPLETKLPNAPHMEIYCLYGVGIPTERSHVHKFSPSDKCKRVPFQIDSSEDGEKGSWLQKGVYFEDGDESVPVISSGFMCAKGWRGRTRFNPYGMDTYIREYQHKQPSSLLEGRGLDSRAHVNIMGNVALIEDVLRVAGGATGADIGGDRIFSDIMKMSERINLRL* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01035 633 SUPERFAMILY alpha/beta-Hydrolases 127 347 IPR029058 -
Rops3g01035 633 Gene3D alpha/beta hydrolase 112 291 IPR029058 -
Rops3g01035 633 Pfam Lecithin:cholesterol acyltransferase 86 593 IPR003386 GO:0006629|GO:0008374
Rops3g01035 633 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 7 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01035 Rops-Chr3 13524949 13529711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01035 2 633 Acyl Lipid Metabolism Gene Families AT3G44830 65.517 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01035 K00679 - cave:132163820 958.362