Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01028 ATGGAAAAGCTTAGTGACCTTATCACCATTCTTCTGTTCATTGGTCTTTTGTTTCATGGAGGAAAGGTTACAGCTTTGAAGTGCCAAGATGGATCAGAGGAATGGGGATATGTGCAAGTCAGACCCAAAGCCCACATGTTTTGGTGGCTTTATAGAAGTCCTTACAGAGTGGAAGATCCATCTAGGCCATGGCCAATTATTCTCTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAAGAGGTTGGGCCTTTGGACACCAGTTTGAAGCCAAGGAATTCCACATGGTTGAGAAAAGCAGATCTCTTGTTTGTGGATAATCCAGTTGGAACTGGGTACAGTTTTGTGGAGGATTCCAAACTCTTTGTGAAAACAGATGAGGAAGCAGCTACTGACATGACTACATTGTTAATTGAGATGTTCAACAGGGATGAAAAGCTCCAAAAGAGCCCTCTGTTCATTGTGGCGGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGATTATCTGCTCTGAAAGCTATTGAAAATGGGAAATTAAAGCTTAAACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCCCCAGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTCAAAGACCTCTCACGAATTGACGATAATGGACTGAAAAAATCTAACAGTTTAGCTGAGAAGATCAAGCAGCAACTTGTGGATGGTAAATTTGTTGATGCAACCAACACATGGAGTGAACTTGAGTCAGTGATTTCTGCTAGCAGCAACAATGTGGACTTTTACAATTTATTGTTGGATTCTGGAAATGATTTAGTAACCTTATCAGCACTAAAGCTTGAGTTATTCAAAGAAACAGCAATGAAGAGGTACTCCAAGTATCTTACTTCCATGAGGTTGAGGTCATCATCTCCTGGCGGTGATAATGATCTTTACACGTTACTAAACGGTGACATAAAGAAGAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAATGCAGTCAAATGATGTTTTCACAAATCTTGAAGGTGATTTTATGAAGCCAAGAATTAATGAGGTTGATGAGTTGCTGGCTAAGGGGGTCAATGTGACAGTGTACAATGGACAAGTTGATCTGATTTGTGCAACCAAAGGGACTGAAGCTTGGCTTAGCAAACTCAAGTGGGAAGGGCTTCAAGATTTCTTGGGGAAAGACAGAACACCCCTCTACTGTGGAAGTGACAAAAAGACCAAAGGCTTTGTTAAGTCATACAAAAACCTACACTTCTATTGGATCCTTGGAGCTGGCCATTTTGTACCTACTGATCAGCCATGCGTGGCACTAGACATGGTTGGTGCATTCACACAGTCACCAGCAGCTTGA 1380 0.4232 MEKLSDLITILLFIGLLFHGGKVTALKCQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDPSRPWPIILWLQGGPGASGVGIGNFEEVGPLDTSLKPRNSTWLRKADLLFVDNPVGTGYSFVEDSKLFVKTDEEAATDMTTLLIEMFNRDEKLQKSPLFIVAESYGGKFAVTLGLSALKAIENGKLKLKLGGVALGDSWISPEDFVFSWGPLLKDLSRIDDNGLKKSNSLAEKIKQQLVDGKFVDATNTWSELESVISASSNNVDFYNLLLDSGNDLVTLSALKLELFKETAMKRYSKYLTSMRLRSSSPGGDNDLYTLLNGDIKKKLKIIPENVTWGMQSNDVFTNLEGDFMKPRINEVDELLAKGVNVTVYNGQVDLICATKGTEAWLSKLKWEGLQDFLGKDRTPLYCGSDKKTKGFVKSYKNLHFYWILGAGHFVPTDQPCVALDMVGAFTQSPAA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01028 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 443 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 Pfam Serine carboxypeptidase 31 454 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 SUPERFAMILY alpha/beta-Hydrolases 32 456 IPR029058 -
Rops3g01028 459 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Rops3g01028 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Rops3g01028 459 Gene3D alpha/beta hydrolase 21 458 IPR029058 -
Rops3g01028 459 FunFam Carboxypeptidase 18 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01028 Rops-Chr3 13318975 13323131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01028 K09646 - gmx:100787940 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01028 3 13318975 13323131 Rops3g01028 3 13318975 13323131 ECH