Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01019 ATGGCACTTCTACACTCTATCTCTGCCTCAGCAACCACTCTCACACTTTCATCACCAAGAACCAAACCTCCGAACCCGAATCCTTTTCTTCCCTCTTCATCCTTCACAAAGTTACCATTTTTATCAAAACAAACAAGACCCAGAAGCAGAAGAGACCTTTCCCTACACGTTGCTGCACCACCCACAACAATTGAACCCGATCAATCACCCCCAGAAGCGGAAAGTGGTGAAATTGATGAAGAGTTTGGTGATGAAAGCTCATCCTCAAAGTTTTCTTGGAAGGATCATTGGTACCCTGTTTCGTTAATTGAAGATCTGAATCCTCGTTTGCCAACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTTTGGTATGATAACAAAAACTCCCAATGGGTTGCTTTCGATGATAAATGCCCACATCGTCTTGCCCCTTTATCTGAAGGAAGAATTGATGAAAATGGAAACTTGCAGTGTTCTTATCATGGATGGTCTTTTGATGGGTGTGGATCTTGCACTGTGATACCTCAGGCTTCACCTGAAGGCCCTGAAGCACGTGCAGTTCGTTCTCCTCGAGCATGTGCCACTAGGTTCCCTACTATGGTGTCTCAGGGTTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAAAGTTTCCAAGCCTCCATTGTTGCCTGATGACTTAGACAAACCAGAGTTTGCCACGGTTAACATACAGCGTGATTTGTTCTATGGCTATGATACTCTCATGGAGAATGTATCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGATAGAGCCAAGCCTTTGCCATTCAAGATGGAATCTCGTGGCCCAGGGGGCTTTGCAGGAGCTAATGAAGGGAACCCACGGATCAGTGCCAAATTTGTTGCACCATGTTATTATATGAACAAGGTTGAGATTGATACCAAACTCCCAATAGTCGGTGACCAGAAATGGGTTGTATGGATATGTTCCTTCAATGTTCCCATGGCACCTGGTAAGACCCGCTCCATTGTTTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTCATTCCTAGATGGTATGAACATTGGACCTCAAACAAGGTTTATGATGGAGACATGATTGTCCTTCAAGGTCAAGAGAAAATCTTTCTTGCAGAAACCGAGGCAGGCAGTGACATCAACAAACAGTACACAAACCTCACCTTCACACCAACACAAGCAGATCGTTTTGTCCTGGCATTCCGCAATTGGCTGAGGCGACATGGCAACGGCCAACCAGAGTGGTTTGGCAAGAGCAGCAACCAGCCATTGCCATCAACCATTCTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACACTCAAGTGTTCAGCATGTAAAGGAGCTTACGAGGGATTTGAAACATGGCAGAAAATCCTGATTGGTGCAACAGTTGTGTTTTGTGCAACATCAGGGATTCCATCAGATACCCAGTTGCGTGTACTTTTGGCTGGACTTGCACTTGCTAGACGAAGTTGGAATAAGAAGAGAGAAAGAAAAAGAGCGAATGAGGAAGAAGGAAAGAAAGAGAAAGAGAAGAAATATGGATGGTTGCCGGTGAAGGTGATTATCGACGGCACAGTGGCATTGGACATGTCGTTGATGTTCGGCAGCTGA 1701 0.4556 MALLHSISASATTLTLSSPRTKPPNPNPFLPSSSFTKLPFLSKQTRPRSRRDLSLHVAAPPTTIEPDQSPPEAESGEIDEEFGDESSSSKFSWKDHWYPVSLIEDLNPRLPTPFQLLGREIVLWYDNKNSQWVAFDDKCPHRLAPLSEGRIDENGNLQCSYHGWSFDGCGSCTVIPQASPEGPEARAVRSPRACATRFPTMVSQGLLFVWPDENGWEKAKVSKPPLLPDDLDKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMESRGPGGFAGANEGNPRISAKFVAPCYYMNKVEIDTKLPIVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVIPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETEAGSDINKQYTNLTFTPTQADRFVLAFRNWLRRHGNGQPEWFGKSSNQPLPSTILSKRQMLDRFEQHTLKCSACKGAYEGFETWQKILIGATVVFCATSGIPSDTQLRVLLAGLALARRSWNKKRERKRANEEEGKKEKEKKYGWLPVKVIIDGTVALDMSLMFGS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01019 566 CDD Rieske_RO_Alpha_PaO 80 219 - -
Rops3g01019 566 Gene3D - 92 234 IPR036922 GO:0051537
Rops3g01019 566 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 22 489 - -
Rops3g01019 566 MobiDBLite consensus disorder prediction 1 20 - -
Rops3g01019 566 Gene3D - 235 438 - -
Rops3g01019 566 MobiDBLite consensus disorder prediction 1 91 - -
Rops3g01019 566 Pfam Pheophorbide a oxygenase 305 399 IPR013626 GO:0010277
Rops3g01019 566 Pfam Rieske [2Fe-2S] domain 96 180 IPR017941 GO:0051537
Rops3g01019 566 SUPERFAMILY ISP domain 90 215 IPR036922 GO:0051537
Rops3g01019 566 SUPERFAMILY Bet v1-like 204 438 - -
Rops3g01019 566 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 97 209 IPR017941 GO:0051537
Rops3g01019 566 Coils Coil 522 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01019 Rops-Chr3 13192209 13199262 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01019 K13071 - gmx:100812162 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01019 3 13192209 13199262 Rops3g01019 3 13192209 13199262 ECH