Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01008 ATGCGAGGAGAGAGAATGGCGAAGAAATCATCTATTGGAAGCTTAATGCGTAAGAAGCTCTCTGATATCACCAACAACAACTCTCACTCTCAATTTCAAGAAGAGAACAACAACCACACACTCGACACTTTCCCTTCTGATAAGGATTGCGTTCAACAACTCCTTAAGGAAAGAGCGACTTTGATTCAACTCCTTACAGAGAGAAATAAAATTATTGAAACCAATGGAGCTGAGCTGCAGAGGCTTAGATCAGATATAAAGAAGCTTCAACTACAAAACTGGAATCTTGCTCAGTCCAATAGTCACATGTTAGCGGAGCTTAACTTGGGGAGGGAAAGGATAAAAACACTGCAGCATGAAATTTTGTGGAGGGCTGCTTTGATTAAAGGAAAGACCATGGATGTGCAGGAAAAAGTGGAGATTGACTATGAAAAAAATACGGCATTGTCACAGTCACAGGAAGGAGATGAAAAAGCAAGGCAGCCATCCCCTAAAACTAGCAATGATGAACAACACAGCAATAAGAATAGAAGACGTATAAGGAGTAGATGTAAATCTACTGGTTCTTCTTCTAATGCTTCCACAAAGAATACAAGCAAAGACAAGGTCAAAGACAATAGGAGACGTTTGAGGAGACATTCTGCTACGTTCAAAACCCATGAACATGAACCTCTAGAAAATTTGTTCGAGCTAGAGGATGCTCAATATCTTATCACTCAATCTGGACCTAACATGCTGAGTTTACCAGCTATAAAAACTGAAACAGGAGAAAGTTCTGTTTTACGAAACGAAGCTCCAAGGTATTCTTTTGGAAGACCCTTGCGAAGAGCAGTTGAGAAGGTTCAATCTTACAAGGAGATTCCTCTAAATGTCAAGATGAGAAGACTATAA 891 0.3984 MRGERMAKKSSIGSLMRKKLSDITNNNSHSQFQEENNNHTLDTFPSDKDCVQQLLKERATLIQLLTERNKIIETNGAELQRLRSDIKKLQLQNWNLAQSNSHMLAELNLGRERIKTLQHEILWRAALIKGKTMDVQEKVEIDYEKNTALSQSQEGDEKARQPSPKTSNDEQHSNKNRRRIRSRCKSTGSSSNASTKNTSKDKVKDNRRRLRRHSATFKTHEHEPLENLFELEDAQYLITQSGPNMLSLPAIKTETGESSVLRNEAPRYSFGRPLRRAVEKVQSYKEIPLNVKMRRL* 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01008 296 Pfam Shugoshin C terminus 271 295 IPR011515 GO:0000775|GO:0005634|GO:0045132
Rops3g01008 296 MobiDBLite consensus disorder prediction 158 176 - -
Rops3g01008 296 Coils Coil 72 99 - -
Rops3g01008 296 MobiDBLite consensus disorder prediction 146 218 - -
Rops3g01008 296 PANTHER SHUGOSHIN 2 224 295 IPR044693 GO:0000775|GO:0034090|GO:0045144
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g01008 Rops-Chr3 12995905 12999576 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01008 - - gmx:100801538 394.045