Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01005 ATGGTGGAACAGAAAAGACCCCCAAAGAACAGGGGTTCTTACCTCATCAGTAACAATCACCACCATGCAAAACCACACAAAACAACAACCCATGTGTCAAGAACACTTTCTGAATCTTTGTCTACCAACACCACAGTTCAATCACAAGCTCCAAAAACTCTAGGGTCATTGAAGAACTTGAAGGTGTTTGTTTATGATCTTCCTCCGAAGTACAACACTGATTGGCTCGCCAATGAGAGGTGTAGCAGTCATTTGTTTGCATCTGAGGTTGCAATTCACAGGGCACTTTTGACCAGTGAAGTTCGTACCTTTGACCCTTATGAAGCTGACTTTTTCTTCGTACCCGTTTACGTTTCTTGCAACTTCAGCACTGTCAATGGCTTCCCGGCGATTGGTCACGCGCGTTCCCTCATTTCCTCCGCTGTTAAACTAATCTCAACGGAGTACCCATTCTGGAACCGTAGCAAAGGTTCCGACCACGTTTTCGTCGCTTCCCATGACTTTGGCTCTTGTTTCCATACCCTGGAGGACGTGGCGATTGCAGATGGGGTGCCAGAAATCATGAAGAAGTCCATCGTGTTACAAACTTTTGGCGTTGCTTACGATCATCCATGCCAAAAGGTTGAGCATGTGGTAATTCCGCCATACGTTTCGCCGGAAAAAGTACAGAATACGATGGAAAATTTCCCGGTGAATGGACGGCGAGATATTTGGGTTTTCTTCCGGGGAAAAATGGAGGTTCATCCTAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGCGTACCATGATATGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTACAGAGACATAGATTTGCCGGTTACCAGTCAGAGATTGCTCGTTCGGTTTTTTGTTTATGTCCATTGGGGTGGGCCCCATGGAGTCCGAGGTTAGTTGAATCGGTTGCTTTGGGTTGCGTGCCGGTTGTCATAGCGGATGGTATTCGGTTGCCGTTTAACTCCGCCGTGAAGTGGTCGGCGATATCGGTGAAGGTGGCGGAGAGGGACGTGGGGAGGCTGGCGGAGATTTTGGAACACGTGGCGGCGACTAACCTAAGCACCATTCAGAGGAACCTTTGGGACCCACGCACGAAGAAAGCACTGCTTTTTAATAGTCAGGTCCAGGAAGGTGATGCCACGTGGCAGGTCCTACGTGCCTTGAGTGAAAAGCTGGATAGGTCTTATAGGGGTTCCAGGGTTTCACGCCAATTGGAAATTGACACGTCATGA 1260 0.4825 MVEQKRPPKNRGSYLISNNHHHAKPHKTTTHVSRTLSESLSTNTTVQSQAPKTLGSLKNLKVFVYDLPPKYNTDWLANERCSSHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLISSAVKLISTEYPFWNRSKGSDHVFVASHDFGSCFHTLEDVAIADGVPEIMKKSIVLQTFGVAYDHPCQKVEHVVIPPYVSPEKVQNTMENFPVNGRRDIWVFFRGKMEVHPKNVSGRFYSKKVRTMIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFNSAVKWSAISVKVAERDVGRLAEILEHVAATNLSTIQRNLWDPRTKKALLFNSQVQEGDATWQVLRALSEKLDRSYRGSRVSRQLEIDTS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01005 419 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 57 376 IPR004263 GO:0006486|GO:0016757
Rops3g01005 419 Pfam Exostosin family 58 356 IPR040911 -
Rops3g01005 419 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01005 Rops-Chr3 12967392 12969807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01005 K20889 - gmx:100782077 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00634 7 8311310 8313675 Rops3g01005 3 12967392 12969807 PCT