Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01000 ATGGCATCATCACCAACCTTCTCTAAGATATCTTTGTCTCTTTTGTTGCTCTTTTTCATTTCACTTTCTTCCTCCTATGCATCTTCTCGTTTGGTTACAACATCCTATTCACCGAAACAACAAGCAGAAAAGCTCATAAGAGCCTTTAACCTATTTCCAAAGGACCCAGTTAACATAAGACTAGGTGACCACCATGTTGATTTTGTCCCTGGAAAGATTGTGGAGAAGAAGTTTTCACTTTTTGGTGATTCTGGGCCTTCTGTTGAAGAACTTGGTCACCATGCAGGGTTCTATTCGCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGTAACAGTAAGGATGATCCAGTTGTAATATGGTTGACTGGAGGACCAGGGTGCAGCAGTGAAATAGCTTTGTTTTATGAGAATGGTCCTTTCCATATTACCAGTAACTTGTCTCTTGTATGGAATGACTATGGCTGGGACAAGGCATCAAATATTCTATTTGTTGACCAACCCATAGGGACAGGTTTCAGCCACACTTCTAATGATTCTGACATTCCCCATGATGAAAATGGAGTTAGCAATGATTTGTATGACTTTTTACAGGAATTTTTCATGCAACACCCTCAGTTCGTTAAGAATGATTTCTATATTACTGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCCCGGGTTCACCAAGGAAATAAAGAAAAGCAAGGAATTATTATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAACCAACCCTGGAATTCAATACCAAGCATACACAGACTTTGCATTAGACAATGGATTAATTACAAAAGCGGATCATGATAGTATCAACAAGTTGATACCACAGTGTGAGCAGAGCGTAAAAGCTTGCGAAACCGAAGGTGGAACAAGTTGTGACTTGGCGTTAAGTTATTGTGGAGTCATCTTTAGGGATGTCATATCTATTGCTGGTCACATTAATTACTTTAACATTAGAAAGAAGTGTGAGGGAGAATTGTGTTATGACTTCTCAAACGTGGAGAAACTTCTAAACGAGAAGACAGTGAGGGATGCTTTAGGTGTGGGGAACTTGGAGTGGGTTTCATGCAGTATTGCAGTGTATGTTGCTATGTCGCAGGACTGGATGAAAAACTTGGAAGTGGGTATTCCTGCTCTTCTTGAAGATGGAATCAAGTTGCTGGTGTATGCTGGGGAGTATGATTTTGTATGCAACTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGGAGTGGTTAGGCCAAAAGCAATTTGGGGCATCCCCTACAGTGAAATTTTTGGTTGATGGGGCAGAAGCAGGGTTGCTGAATAGCCATGGACCTCTCTCTTTCCTCAAGGTACATGGGGCTGGGCACATGGTGCCTATGGATCAACCTAAAGCTGCACTTCAAATGCTTACAAACTGGATGGCAGGAAAACTAACTTGA 1476 0.4146 MASSPTFSKISLSLLLLFFISLSSSYASSRLVTTSYSPKQQAEKLIRAFNLFPKDPVNIRLGDHHVDFVPGKIVEKKFSLFGDSGPSVEELGHHAGFYSLPRSKAARMFYFFFESRNSKDDPVVIWLTGGPGCSSEIALFYENGPFHITSNLSLVWNDYGWDKASNILFVDQPIGTGFSHTSNDSDIPHDENGVSNDLYDFLQEFFMQHPQFVKNDFYITGESYAGHYIPALASRVHQGNKEKQGIIINLKGFAIGNGLTNPGIQYQAYTDFALDNGLITKADHDSINKLIPQCEQSVKACETEGGTSCDLALSYCGVIFRDVISIAGHINYFNIRKKCEGELCYDFSNVEKLLNEKTVRDALGVGNLEWVSCSIAVYVAMSQDWMKNLEVGIPALLEDGIKLLVYAGEYDFVCNWLGNSRWVHAMEWLGQKQFGASPTVKFLVDGAEAGLLNSHGPLSFLKVHGAGHMVPMDQPKAALQMLTNWMAGKLT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01000 491 Gene3D alpha/beta hydrolase 74 490 IPR029058 -
Rops3g01000 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 93 475 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Rops3g01000 491 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Rops3g01000 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 SUPERFAMILY alpha/beta-Hydrolases 92 489 IPR029058 -
Rops3g01000 491 Pfam Serine carboxypeptidase 91 487 IPR001563 GO:0004185|GO:0006508
Rops3g01000 491 FunFam Carboxypeptidase 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01000 Rops-Chr3 12918736 12922629 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01000 K16298 - gmx:100798795 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01000 3 12918736 12922629 Rops3g01000 3 12918736 12922629 ECH