Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00991 ATGGGCGCGAAGAAGAAATCAGACGGTGAAAACAACGATAACAACACCACCGTGGTCTTGAAGGTTGACTTGCATTGTGACGGTTGCGCTACCAAAATCATCAAATACCTTCGTGCTTTCAAAGGGGTGGAGACGGTGAAGGCGGAGAGTGACACCGGGAAAATAACTGTCACCGGAAAAGTGGACCCCACCAAATTGAGGGACAGTCTTGGGGAGAAGATAAAGAAGAAGGTGGAACTCATCTCTCCACAACCCAAGAAGGAGAAGGAGAACAAAGACACTGAACCCAACAACAAATCCGAGAAAAAAAATGAAGATAAAAAATCCAAAGACAAAGAGGCGGCGGTGACTACGGCGGTTCTTAAGGTGGCACTACACTGCCAGGGATGCCTTGACAGGATTGGCAAGACTGTGTTGAAAACCAAAGGAGTTCATGAAATGGCTATAGACAAGGAAAAGGAAACCGTGACTGTGAAGGGGACAATGGACGTGAAAGCTCTGGTAGGGAATCTAATGGAGAAGCTTAAGAGGAAGGTTGAGGTGGTCCCTCCAAAGAAAGACAAGGAAGGTGCTGGCGGTGACAAGGAAGGAGGCAAGAAGAAGAACAAGAACAAGGGTAATAGTGATGGTGAAGGAGGAGATAATAATAATAATGAGAATGATGAGGTGGGTGAAGTGAAAATGGAGCATCTCAGAATGGAGTATTTGCAAATGGCACCTGCTCCCTTTGGCTTTGGTTATGGGTATGGCAATGTTGGCGGCTATAACTATGGACAAGTCTACCCGGAGCAGTTACATTTTCATGTGCATCCACAATCACATGCGATGTTCAGTGATGAAAACCCAAATGCTTGCTCTGTCATGTGA 867 0.4602 MGAKKKSDGENNDNNTTVVLKVDLHCDGCATKIIKYLRAFKGVETVKAESDTGKITVTGKVDPTKLRDSLGEKIKKKVELISPQPKKEKENKDTEPNNKSEKKNEDKKSKDKEAAVTTAVLKVALHCQGCLDRIGKTVLKTKGVHEMAIDKEKETVTVKGTMDVKALVGNLMEKLKRKVEVVPPKKDKEGAGGDKEGGKKKNKNKGNSDGEGGDNNNNENDEVGEVKMEHLRMEYLQMAPAPFGFGYGYGNVGGYNYGQVYPEQLHFHVHPQSHAMFSDENPNACSVM* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00991 288 MobiDBLite consensus disorder prediction 75 112 - -
Rops3g00991 288 Gene3D - 115 189 - -
Rops3g00991 288 Gene3D - 14 89 - -
Rops3g00991 288 MobiDBLite consensus disorder prediction 179 208 - -
Rops3g00991 288 SUPERFAMILY HMA, heavy metal-associated domain 116 180 IPR036163 GO:0046872
Rops3g00991 288 ProSiteProfiles Heavy-metal-associated domain profile. 15 86 IPR006121 GO:0046872
Rops3g00991 288 Pfam Heavy-metal-associated domain 20 79 IPR006121 GO:0046872
Rops3g00991 288 Pfam Heavy-metal-associated domain 121 180 IPR006121 GO:0046872
Rops3g00991 288 ProSiteProfiles Heavy-metal-associated domain profile. 116 187 IPR006121 GO:0046872
Rops3g00991 288 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 8 288 IPR044594 GO:0046872
Rops3g00991 288 SUPERFAMILY HMA, heavy metal-associated domain 16 80 IPR036163 GO:0046872
Rops3g00991 288 CDD HMA 120 160 IPR006121 GO:0046872
Rops3g00991 288 CDD HMA 19 79 IPR006121 GO:0046872
Rops3g00991 288 MobiDBLite consensus disorder prediction 179 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00991 Rops-Chr3 12731636 12733480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00991 - - gmx:100797817 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00991 3 12731636 12733480 Rops3g00991 3 12731636 12733480 ECH